gene detail

Gene description

TAIR ID: AT5G56980

No short description

Pathogen responsiveness: -1.04

General responsiveness: 1.17

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

chloroplast

GO molecular function

molecular_function

Protein domain

Pfam	PF14364, Domain of unknown function (DUF4408)
Pfam	PF05553, Cotton fibre expressed protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE56094_WT_HRPA- view
GSE13739_EDS16_GO view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.57	1.98E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.66	2.59E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.54	6.52E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.54	4.83E-06
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.84	2.93E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.94	3.12E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.66	2.68E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.82	2.38E-07
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.72	1.89E-10