co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G56980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019593: mannitol biosynthetic process	0.00E+00
2	GO:0090421: embryonic meristem initiation	7.41E-06
3	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.67E-05
4	GO:0032957: inositol trisphosphate metabolic process	1.04E-04
5	GO:2000033: regulation of seed dormancy process	1.59E-04
6	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	2.20E-04
7	GO:0009880: embryonic pattern specification	2.52E-04
8	GO:0001708: cell fate specification	2.85E-04
9	GO:0010629: negative regulation of gene expression	3.54E-04
10	GO:0005986: sucrose biosynthetic process	4.64E-04
11	GO:0010200: response to chitin	6.03E-04
12	GO:2000377: regulation of reactive oxygen species metabolic process	6.20E-04
13	GO:0009863: salicylic acid mediated signaling pathway	6.20E-04
14	GO:0010187: negative regulation of seed germination	6.20E-04
15	GO:0009737: response to abscisic acid	7.75E-04
16	GO:0045492: xylan biosynthetic process	8.32E-04
17	GO:0010029: regulation of seed germination	1.45E-03
18	GO:0009834: plant-type secondary cell wall biogenesis	1.78E-03
19	GO:0006865: amino acid transport	1.89E-03
20	GO:0009867: jasmonic acid mediated signaling pathway	1.95E-03
21	GO:0042538: hyperosmotic salinity response	2.70E-03
22	GO:0009740: gibberellic acid mediated signaling pathway	3.44E-03
23	GO:0042545: cell wall modification	3.51E-03
24	GO:0018105: peptidyl-serine phosphorylation	3.66E-03
25	GO:0045490: pectin catabolic process	5.21E-03
26	GO:0009739: response to gibberellin	5.63E-03
27	GO:0009723: response to ethylene	7.79E-03
28	GO:0046777: protein autophosphorylation	8.57E-03
29	GO:0009738: abscisic acid-activated signaling pathway	1.58E-02
30	GO:0009611: response to wounding	1.64E-02
31	GO:0035556: intracellular signal transduction	1.68E-02
32	GO:0006468: protein phosphorylation	2.24E-02
33	GO:0006355: regulation of transcription, DNA-templated	2.35E-02
34	GO:0009414: response to water deprivation	2.62E-02
35	GO:0006979: response to oxidative stress	2.68E-02
36	GO:0005975: carbohydrate metabolic process	3.59E-02
37	GO:0007275: multicellular organism development	4.32E-02
38	GO:0006351: transcription, DNA-templated	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
2	GO:0047274: galactinol-sucrose galactosyltransferase activity	3.67E-05
3	GO:0047325: inositol tetrakisphosphate 1-kinase activity	3.67E-05
4	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	3.67E-05
5	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	5.65E-05
6	GO:0000989: transcription factor activity, transcription factor binding	2.85E-04
7	GO:0004857: enzyme inhibitor activity	6.20E-04
8	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.30E-03
9	GO:0004683: calmodulin-dependent protein kinase activity	1.56E-03
10	GO:0005516: calmodulin binding	2.17E-03
11	GO:0044212: transcription regulatory region DNA binding	2.90E-03
12	GO:0015171: amino acid transmembrane transporter activity	3.03E-03
13	GO:0045330: aspartyl esterase activity	3.03E-03
14	GO:0030599: pectinesterase activity	3.44E-03
15	GO:0000287: magnesium ion binding	6.95E-03
16	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.22E-02
17	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.96E-02
18	GO:0005507: copper ion binding	2.07E-02
19	GO:0005509: calcium ion binding	2.52E-02
20	GO:0003824: catalytic activity	2.85E-02
21	GO:0046983: protein dimerization activity	3.28E-02
22	GO:0004842: ubiquitin-protein transferase activity	3.36E-02
23	GO:0005515: protein binding	3.54E-02
24	GO:0016301: kinase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	3.62E-03
2	GO:0046658: anchored component of plasma membrane	6.32E-03
3	GO:0005737: cytoplasm	9.37E-03
4	GO:0005618: cell wall	1.14E-02
5	GO:0005622: intracellular	2.43E-02
6	GO:0005634: nucleus	3.05E-02
7	GO:0000139: Golgi membrane	3.31E-02
8	GO:0009506: plasmodesma	3.83E-02
9	GO:0005886: plasma membrane	4.97E-02