gene detail

Gene description

TAIR ID: AT5G55920

Short description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

maturation of LSU-rRNA, rRNA base methylation, leaf morphogenesis, root morphogenesis, cell proliferation

GO cellular component

nucleolus, cytosol, nucleus

GO molecular function

rRNA (cytosine-C5-)-methyltransferase activity

Protein domain

Pfam	PF17125, N-terminal domain of 16S rRNA methyltransferase RsmF
Pfam	PF01189, 16S rRNA methyltransferase RsmB/F

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.97	3.84E-04