GO Enrichment Analysis of Co-expressed Genes with
AT5G55920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009560: embryo sac egg cell differentiation | 0.00E+00 |
| 2 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 3 | GO:0051131: chaperone-mediated protein complex assembly | 2.29E-06 |
| 4 | GO:0061077: chaperone-mediated protein folding | 5.25E-06 |
| 5 | GO:0046686: response to cadmium ion | 2.31E-05 |
| 6 | GO:0009408: response to heat | 2.76E-05 |
| 7 | GO:0009845: seed germination | 2.80E-05 |
| 8 | GO:0009699: phenylpropanoid biosynthetic process | 3.77E-05 |
| 9 | GO:0018920: glyphosate metabolic process | 6.58E-05 |
| 10 | GO:0009966: regulation of signal transduction | 6.58E-05 |
| 11 | GO:0071277: cellular response to calcium ion | 6.58E-05 |
| 12 | GO:0010155: regulation of proton transport | 1.59E-04 |
| 13 | GO:0006611: protein export from nucleus | 1.59E-04 |
| 14 | GO:0009805: coumarin biosynthetic process | 1.59E-04 |
| 15 | GO:0019521: D-gluconate metabolic process | 1.59E-04 |
| 16 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.59E-04 |
| 17 | GO:0000055: ribosomal large subunit export from nucleus | 2.69E-04 |
| 18 | GO:0009306: protein secretion | 2.92E-04 |
| 19 | GO:0009399: nitrogen fixation | 3.90E-04 |
| 20 | GO:0001709: cell fate determination | 5.20E-04 |
| 21 | GO:1902347: response to strigolactone | 5.20E-04 |
| 22 | GO:0033320: UDP-D-xylose biosynthetic process | 5.20E-04 |
| 23 | GO:0007166: cell surface receptor signaling pathway | 6.21E-04 |
| 24 | GO:0007029: endoplasmic reticulum organization | 6.60E-04 |
| 25 | GO:0009816: defense response to bacterium, incompatible interaction | 6.87E-04 |
| 26 | GO:0016070: RNA metabolic process | 8.06E-04 |
| 27 | GO:0042732: D-xylose metabolic process | 8.06E-04 |
| 28 | GO:0009423: chorismate biosynthetic process | 9.59E-04 |
| 29 | GO:0006457: protein folding | 1.01E-03 |
| 30 | GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway | 1.12E-03 |
| 31 | GO:0070370: cellular heat acclimation | 1.12E-03 |
| 32 | GO:0006744: ubiquinone biosynthetic process | 1.12E-03 |
| 33 | GO:0080167: response to karrikin | 1.18E-03 |
| 34 | GO:0006402: mRNA catabolic process | 1.29E-03 |
| 35 | GO:0050821: protein stabilization | 1.29E-03 |
| 36 | GO:0048658: anther wall tapetum development | 1.29E-03 |
| 37 | GO:0009808: lignin metabolic process | 1.47E-03 |
| 38 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 1.65E-03 |
| 39 | GO:0046685: response to arsenic-containing substance | 1.65E-03 |
| 40 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.65E-03 |
| 41 | GO:0006364: rRNA processing | 1.79E-03 |
| 42 | GO:0006349: regulation of gene expression by genetic imprinting | 1.85E-03 |
| 43 | GO:0090332: stomatal closure | 1.85E-03 |
| 44 | GO:0048829: root cap development | 2.05E-03 |
| 45 | GO:0019538: protein metabolic process | 2.05E-03 |
| 46 | GO:0009073: aromatic amino acid family biosynthetic process | 2.26E-03 |
| 47 | GO:0009750: response to fructose | 2.26E-03 |
| 48 | GO:0009698: phenylpropanoid metabolic process | 2.26E-03 |
| 49 | GO:0009742: brassinosteroid mediated signaling pathway | 2.68E-03 |
| 50 | GO:0034605: cellular response to heat | 2.93E-03 |
| 51 | GO:0090351: seedling development | 3.16E-03 |
| 52 | GO:0009225: nucleotide-sugar metabolic process | 3.16E-03 |
| 53 | GO:0010187: negative regulation of seed germination | 3.65E-03 |
| 54 | GO:0009611: response to wounding | 4.06E-03 |
| 55 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.43E-03 |
| 56 | GO:0040007: growth | 4.70E-03 |
| 57 | GO:0071215: cellular response to abscisic acid stimulus | 4.70E-03 |
| 58 | GO:0009686: gibberellin biosynthetic process | 4.70E-03 |
| 59 | GO:0006817: phosphate ion transport | 4.98E-03 |
| 60 | GO:0045492: xylan biosynthetic process | 4.98E-03 |
| 61 | GO:0010501: RNA secondary structure unwinding | 5.55E-03 |
| 62 | GO:0042631: cellular response to water deprivation | 5.55E-03 |
| 63 | GO:0009960: endosperm development | 5.85E-03 |
| 64 | GO:0009749: response to glucose | 6.45E-03 |
| 65 | GO:0002229: defense response to oomycetes | 6.76E-03 |
| 66 | GO:0031047: gene silencing by RNA | 7.08E-03 |
| 67 | GO:0032502: developmental process | 7.08E-03 |
| 68 | GO:0010090: trichome morphogenesis | 7.40E-03 |
| 69 | GO:0048366: leaf development | 7.88E-03 |
| 70 | GO:0006904: vesicle docking involved in exocytosis | 8.06E-03 |
| 71 | GO:0007267: cell-cell signaling | 8.06E-03 |
| 72 | GO:0010286: heat acclimation | 8.06E-03 |
| 73 | GO:0016579: protein deubiquitination | 8.40E-03 |
| 74 | GO:0001666: response to hypoxia | 8.74E-03 |
| 75 | GO:0009615: response to virus | 8.74E-03 |
| 76 | GO:0048573: photoperiodism, flowering | 9.79E-03 |
| 77 | GO:0016049: cell growth | 1.02E-02 |
| 78 | GO:0008219: cell death | 1.05E-02 |
| 79 | GO:0009813: flavonoid biosynthetic process | 1.09E-02 |
| 80 | GO:0010311: lateral root formation | 1.09E-02 |
| 81 | GO:0009834: plant-type secondary cell wall biogenesis | 1.13E-02 |
| 82 | GO:0032259: methylation | 1.18E-02 |
| 83 | GO:0045087: innate immune response | 1.24E-02 |
| 84 | GO:0016051: carbohydrate biosynthetic process | 1.24E-02 |
| 85 | GO:0006397: mRNA processing | 1.28E-02 |
| 86 | GO:0006887: exocytosis | 1.40E-02 |
| 87 | GO:0006468: protein phosphorylation | 1.40E-02 |
| 88 | GO:0009744: response to sucrose | 1.49E-02 |
| 89 | GO:0009809: lignin biosynthetic process | 1.84E-02 |
| 90 | GO:0006857: oligopeptide transport | 1.93E-02 |
| 91 | GO:0006417: regulation of translation | 1.98E-02 |
| 92 | GO:0043086: negative regulation of catalytic activity | 2.07E-02 |
| 93 | GO:0009555: pollen development | 2.18E-02 |
| 94 | GO:0009553: embryo sac development | 2.31E-02 |
| 95 | GO:0006396: RNA processing | 2.41E-02 |
| 96 | GO:0009737: response to abscisic acid | 2.51E-02 |
| 97 | GO:0000398: mRNA splicing, via spliceosome | 2.62E-02 |
| 98 | GO:0006413: translational initiation | 3.32E-02 |
| 99 | GO:0009451: RNA modification | 3.54E-02 |
| 100 | GO:0009617: response to bacterium | 3.95E-02 |
| 101 | GO:0042742: defense response to bacterium | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046409: p-coumarate 3-hydroxylase activity | 0.00E+00 |
| 2 | GO:0030621: U4 snRNA binding | 0.00E+00 |
| 3 | GO:0032442: phenylcoumaran benzylic ether reductase activity | 0.00E+00 |
| 4 | GO:0102118: gibberellin A4 carboxyl methyltransferase activity | 0.00E+00 |
| 5 | GO:0016710: trans-cinnamate 4-monooxygenase activity | 0.00E+00 |
| 6 | GO:0047734: CDP-glycerol diphosphatase activity | 0.00E+00 |
| 7 | GO:0032266: phosphatidylinositol-3-phosphate binding | 6.58E-05 |
| 8 | GO:0017151: DEAD/H-box RNA helicase binding | 6.58E-05 |
| 9 | GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity | 6.58E-05 |
| 10 | GO:0008114: phosphogluconate 2-dehydrogenase activity | 6.58E-05 |
| 11 | GO:0080025: phosphatidylinositol-3,5-bisphosphate binding | 6.58E-05 |
| 12 | GO:0010341: gibberellin carboxyl-O-methyltransferase activity | 6.58E-05 |
| 13 | GO:0003729: mRNA binding | 1.52E-04 |
| 14 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 1.59E-04 |
| 15 | GO:0005524: ATP binding | 2.46E-04 |
| 16 | GO:0051082: unfolded protein binding | 2.58E-04 |
| 17 | GO:0043023: ribosomal large subunit binding | 3.90E-04 |
| 18 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.90E-04 |
| 19 | GO:0043015: gamma-tubulin binding | 5.20E-04 |
| 20 | GO:0047631: ADP-ribose diphosphatase activity | 6.60E-04 |
| 21 | GO:0002020: protease binding | 6.60E-04 |
| 22 | GO:0004356: glutamate-ammonia ligase activity | 6.60E-04 |
| 23 | GO:0017070: U6 snRNA binding | 6.60E-04 |
| 24 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.06E-04 |
| 25 | GO:0035673: oligopeptide transmembrane transporter activity | 8.06E-04 |
| 26 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 9.59E-04 |
| 27 | GO:0070403: NAD+ binding | 9.59E-04 |
| 28 | GO:0008143: poly(A) binding | 1.12E-03 |
| 29 | GO:0004143: diacylglycerol kinase activity | 1.12E-03 |
| 30 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.29E-03 |
| 31 | GO:0003951: NAD+ kinase activity | 1.47E-03 |
| 32 | GO:0003678: DNA helicase activity | 1.65E-03 |
| 33 | GO:0015198: oligopeptide transporter activity | 2.48E-03 |
| 34 | GO:0008026: ATP-dependent helicase activity | 2.68E-03 |
| 35 | GO:0019888: protein phosphatase regulator activity | 2.70E-03 |
| 36 | GO:0005528: FK506 binding | 3.65E-03 |
| 37 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.05E-03 |
| 38 | GO:0033612: receptor serine/threonine kinase binding | 4.17E-03 |
| 39 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 4.17E-03 |
| 40 | GO:0018024: histone-lysine N-methyltransferase activity | 5.26E-03 |
| 41 | GO:0042802: identical protein binding | 5.50E-03 |
| 42 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 6.76E-03 |
| 43 | GO:0004518: nuclease activity | 7.08E-03 |
| 44 | GO:0005515: protein binding | 9.17E-03 |
| 45 | GO:0008375: acetylglucosaminyltransferase activity | 9.44E-03 |
| 46 | GO:0004004: ATP-dependent RNA helicase activity | 9.79E-03 |
| 47 | GO:0030247: polysaccharide binding | 9.79E-03 |
| 48 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.02E-02 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.05E-02 |
| 50 | GO:0003723: RNA binding | 1.43E-02 |
| 51 | GO:0043621: protein self-association | 1.57E-02 |
| 52 | GO:0004672: protein kinase activity | 1.57E-02 |
| 53 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.66E-02 |
| 54 | GO:0031625: ubiquitin protein ligase binding | 1.98E-02 |
| 55 | GO:0000166: nucleotide binding | 2.18E-02 |
| 56 | GO:0004674: protein serine/threonine kinase activity | 2.21E-02 |
| 57 | GO:0046910: pectinesterase inhibitor activity | 3.32E-02 |
| 58 | GO:0008017: microtubule binding | 3.60E-02 |
| 59 | GO:0003743: translation initiation factor activity | 3.89E-02 |
| 60 | GO:0005506: iron ion binding | 4.34E-02 |
| 61 | GO:0008168: methyltransferase activity | 4.63E-02 |
| 62 | GO:0046982: protein heterodimerization activity | 4.69E-02 |
| 63 | GO:0003682: chromatin binding | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009506: plasmodesma | 2.28E-05 |
| 2 | GO:0010494: cytoplasmic stress granule | 4.72E-05 |
| 3 | GO:0016442: RISC complex | 6.58E-05 |
| 4 | GO:0030688: preribosome, small subunit precursor | 6.58E-05 |
| 5 | GO:0005829: cytosol | 1.74E-04 |
| 6 | GO:0005730: nucleolus | 2.03E-04 |
| 7 | GO:0005886: plasma membrane | 4.78E-04 |
| 8 | GO:0016363: nuclear matrix | 9.59E-04 |
| 9 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.47E-03 |
| 10 | GO:0048471: perinuclear region of cytoplasm | 2.26E-03 |
| 11 | GO:0005794: Golgi apparatus | 2.75E-03 |
| 12 | GO:0043234: protein complex | 3.40E-03 |
| 13 | GO:0005783: endoplasmic reticulum | 3.54E-03 |
| 14 | GO:0016021: integral component of membrane | 5.31E-03 |
| 15 | GO:0000145: exocyst | 7.08E-03 |
| 16 | GO:0005694: chromosome | 7.08E-03 |
| 17 | GO:0071944: cell periphery | 7.40E-03 |
| 18 | GO:0032580: Golgi cisterna membrane | 7.73E-03 |
| 19 | GO:0005768: endosome | 8.45E-03 |
| 20 | GO:0000932: P-body | 8.74E-03 |
| 21 | GO:0005774: vacuolar membrane | 1.30E-02 |
| 22 | GO:0005618: cell wall | 1.60E-02 |
| 23 | GO:0005635: nuclear envelope | 1.93E-02 |
| 24 | GO:0005681: spliceosomal complex | 2.07E-02 |
| 25 | GO:0016607: nuclear speck | 2.12E-02 |
| 26 | GO:0010008: endosome membrane | 2.12E-02 |
| 27 | GO:0016020: membrane | 3.37E-02 |
| 28 | GO:0005802: trans-Golgi network | 3.50E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 4.26E-02 |
| 30 | GO:0005737: cytoplasm | 4.32E-02 |