Gene: AT5G55740
Gene description
TAIR ID: AT5G55740
Short description: Tetratricopeptide repeat (TPR)-like superfamily protein
Pathogen responsiveness: 0.58
General responsiveness: 1.65
GO biological process
mRNA modification
GO cellular component
intracellular membrane-bounded organelle, chloroplast
GO molecular function
endonuclease activity, RNA binding
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
33 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE11807 | Col, ERF104 ox, water 4 h | Col, ERF104 ox, Flg22 4 h | -1.68 | 6.30E-03 |
| GSE12856 | Col, WT, control | Col, WT, Bg h | -1.83 | 1.20E-07 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | -2.58 | 4.05E-09 |
| GSE17382 | Col, WT, Flg22 0 min | Col, WT, Flg22 60min | -2.00 | 2.41E-02 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 1 h | -1.66 | 1.56E-02 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 2 h | -1.91 | 4.03E-03 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -2.25 | 2.83E-04 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.77 | 3.95E-03 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -2.28 | 2.03E-04 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -2.23 | 1.18E-03 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -2.43 | 4.21E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -2.71 | 2.26E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -3.72 | 1.31E-14 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | -2.02 | 3.20E-05 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -3.29 | 1.63E-06 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | -3.55 | 5.54E-07 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | -2.90 | 6.10E-06 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | -1.98 | 6.78E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -3.14 | 4.88E-14 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | -1.90 | 2.33E-10 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -2.61 | 9.38E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -3.01 | 9.78E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -2.37 | 3.36E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -3.11 | 5.39E-14 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.80 | 2.42E-05 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.44 | 2.70E-07 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.75 | 7.16E-03 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -1.95 | 4.89E-04 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | -1.79 | 1.73E-10 |
| GSE5616 | Col, WT, water 6 h | Col, WT, P. infestans 6 h | -1.76 | 3.48E-07 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -2.30 | 1.77E-03 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | -1.54 | 3.24E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -1.84 | 2.26E-02 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.