Gene: AT5G54840
     


Gene description


TAIR ID: AT5G54840

Short description: Ras-related small GTP-binding family protein

Pathogen responsiveness: 0.15

General responsiveness: 0.46

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G125507  

Wheat: No orthologous gene

GO biological process


cell cycle


GO cellular component


nucleus


GO molecular function


GTPase activity, GTP binding, protein binding


Protein domain


PfamPF00071, Ras family
SMARTSM00175, RAB

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT4G16110

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.554.08E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.831.15E-08
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.549.78E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.352.09E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.129.03E-07
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.462.81E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.806.31E-07
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.673.08E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.938.53E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.042.05E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.431.36E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.861.65E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.791.62E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.145.49E-09
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.023.24E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.843.86E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.824.85E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.734.27E-11
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h1.594.73E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.283.22E-08






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