Gene: AT5G53120
     

Gene description


TAIR ID: AT5G53120

Short description: spermidine synthase 3

Pathogen responsiveness: -0.10

General responsiveness: -0.71

GO biological process


polyamine biosynthetic process, defense response to bacterium, spermine biosynthetic process


GO cellular component


nucleus, cytoplasm


GO molecular function


spermidine synthase activity, spermine synthase activity, protein binding


Protein domain


PfamPF01564, Spermine/spermidine synthase

Transcriptional regulation


Regulator:
AT5G13790, AT1G62300, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.743.43E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.074.05E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.019.69E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.806.26E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.561.75E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.581.05E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.607.02E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.771.63E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.844.02E-11
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.732.32E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.571.75E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.623.87E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.221.97E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.083.99E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.611.82E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.804.87E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.971.42E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.279.26E-06
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.272.01E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.691.80E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.881.91E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.956.63E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.012.17E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.646.04E-06
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.931.77E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.181.08E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.856.34E-03






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