co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0006069: ethanol oxidation	0.00E+00
3	GO:0001881: receptor recycling	0.00E+00
4	GO:0031990: mRNA export from nucleus in response to heat stress	0.00E+00
5	GO:0032780: negative regulation of ATPase activity	0.00E+00
6	GO:0006482: protein demethylation	0.00E+00
7	GO:0046292: formaldehyde metabolic process	0.00E+00
8	GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex	4.18E-05
9	GO:0035344: hypoxanthine transport	4.18E-05
10	GO:0098721: uracil import across plasma membrane	4.18E-05
11	GO:0098702: adenine import across plasma membrane	4.18E-05
12	GO:0048448: stamen morphogenesis	4.18E-05
13	GO:0006772: thiamine metabolic process	4.18E-05
14	GO:0098710: guanine import across plasma membrane	4.18E-05
15	GO:0010450: inflorescence meristem growth	4.18E-05
16	GO:0080173: male-female gamete recognition during double fertilization	4.18E-05
17	GO:0007034: vacuolar transport	6.58E-05
18	GO:0019374: galactolipid metabolic process	1.04E-04
19	GO:0045948: positive regulation of translational initiation	1.04E-04
20	GO:0097054: L-glutamate biosynthetic process	1.04E-04
21	GO:1905182: positive regulation of urease activity	1.04E-04
22	GO:0051262: protein tetramerization	1.04E-04
23	GO:0048833: specification of floral organ number	1.04E-04
24	GO:0019521: D-gluconate metabolic process	1.04E-04
25	GO:0008333: endosome to lysosome transport	1.78E-04
26	GO:1900055: regulation of leaf senescence	1.78E-04
27	GO:0071494: cellular response to UV-C	1.78E-04
28	GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	1.78E-04
29	GO:0006537: glutamate biosynthetic process	2.63E-04
30	GO:0001676: long-chain fatty acid metabolic process	2.63E-04
31	GO:0072334: UDP-galactose transmembrane transport	2.63E-04
32	GO:0010286: heat acclimation	3.27E-04
33	GO:0019676: ammonia assimilation cycle	3.53E-04
34	GO:0006090: pyruvate metabolic process	4.50E-04
35	GO:0009229: thiamine diphosphate biosynthetic process	4.50E-04
36	GO:0006796: phosphate-containing compound metabolic process	5.51E-04
37	GO:0006014: D-ribose metabolic process	5.51E-04
38	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	5.51E-04
39	GO:0015977: carbon fixation	6.58E-04
40	GO:0055114: oxidation-reduction process	7.34E-04
41	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.84E-04
42	GO:0006644: phospholipid metabolic process	8.84E-04
43	GO:0006367: transcription initiation from RNA polymerase II promoter	1.00E-03
44	GO:0009880: embryonic pattern specification	1.00E-03
45	GO:0006098: pentose-phosphate shunt	1.13E-03
46	GO:0000373: Group II intron splicing	1.13E-03
47	GO:0000103: sulfate assimilation	1.39E-03
48	GO:0043085: positive regulation of catalytic activity	1.53E-03
49	GO:0006807: nitrogen compound metabolic process	1.82E-03
50	GO:0006108: malate metabolic process	1.82E-03
51	GO:2000377: regulation of reactive oxygen species metabolic process	2.46E-03
52	GO:0006457: protein folding	2.58E-03
53	GO:0006366: transcription from RNA polymerase II promoter	2.80E-03
54	GO:0006012: galactose metabolic process	3.15E-03
55	GO:0042147: retrograde transport, endosome to Golgi	3.52E-03
56	GO:0034220: ion transmembrane transport	3.71E-03
57	GO:0006662: glycerol ether metabolic process	3.91E-03
58	GO:0019252: starch biosynthetic process	4.31E-03
59	GO:0006623: protein targeting to vacuole	4.31E-03
60	GO:0010193: response to ozone	4.51E-03
61	GO:0031047: gene silencing by RNA	4.72E-03
62	GO:0032502: developmental process	4.72E-03
63	GO:0007264: small GTPase mediated signal transduction	4.72E-03
64	GO:0015979: photosynthesis	5.25E-03
65	GO:0009615: response to virus	5.81E-03
66	GO:0006974: cellular response to DNA damage stimulus	6.27E-03
67	GO:0006950: response to stress	6.50E-03
68	GO:0016042: lipid catabolic process	6.60E-03
69	GO:0009408: response to heat	6.79E-03
70	GO:0008219: cell death	6.98E-03
71	GO:0006499: N-terminal protein myristoylation	7.47E-03
72	GO:0010043: response to zinc ion	7.72E-03
73	GO:0009853: photorespiration	8.23E-03
74	GO:0034599: cellular response to oxidative stress	8.48E-03
75	GO:0006099: tricarboxylic acid cycle	8.48E-03
76	GO:0006631: fatty acid metabolic process	9.28E-03
77	GO:0042542: response to hydrogen peroxide	9.55E-03
78	GO:0051707: response to other organism	9.82E-03
79	GO:0009965: leaf morphogenesis	1.07E-02
80	GO:0042538: hyperosmotic salinity response	1.15E-02
81	GO:0009738: abscisic acid-activated signaling pathway	1.17E-02
82	GO:0009809: lignin biosynthetic process	1.21E-02
83	GO:0048316: seed development	1.39E-02
84	GO:0016569: covalent chromatin modification	1.49E-02
85	GO:0018105: peptidyl-serine phosphorylation	1.59E-02
86	GO:0009651: response to salt stress	2.11E-02
87	GO:0016036: cellular response to phosphate starvation	2.18E-02
88	GO:0040008: regulation of growth	2.22E-02
89	GO:0010150: leaf senescence	2.29E-02
90	GO:0010468: regulation of gene expression	2.60E-02
91	GO:0015031: protein transport	3.11E-02
92	GO:0009658: chloroplast organization	3.13E-02
93	GO:0048366: leaf development	3.52E-02
94	GO:0006810: transport	3.60E-02
95	GO:0010200: response to chitin	3.74E-02
96	GO:0046686: response to cadmium ion	3.81E-02
97	GO:0046777: protein autophosphorylation	3.83E-02
98	GO:0045454: cell redox homeostasis	4.15E-02
99	GO:0045892: negative regulation of transcription, DNA-templated	4.19E-02
100	GO:0006281: DNA repair	4.81E-02
101	GO:0006629: lipid metabolic process	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
2	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
3	GO:0015930: glutamate synthase activity	0.00E+00
4	GO:0051723: protein methylesterase activity	0.00E+00
5	GO:0042030: ATPase inhibitor activity	0.00E+00
6	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
7	GO:0004622: lysophospholipase activity	0.00E+00
8	GO:0004112: cyclic-nucleotide phosphodiesterase activity	4.18E-05
9	GO:0015294: solute:cation symporter activity	4.18E-05
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	4.18E-05
11	GO:0004788: thiamine diphosphokinase activity	4.18E-05
12	GO:0015207: adenine transmembrane transporter activity	4.18E-05
13	GO:0019707: protein-cysteine S-acyltransferase activity	4.18E-05
14	GO:0016041: glutamate synthase (ferredoxin) activity	4.18E-05
15	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	4.18E-05
16	GO:0015208: guanine transmembrane transporter activity	4.18E-05
17	GO:0004022: alcohol dehydrogenase (NAD) activity	5.70E-05
18	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.04E-04
19	GO:0015036: disulfide oxidoreductase activity	1.04E-04
20	GO:0051082: unfolded protein binding	1.13E-04
21	GO:0008964: phosphoenolpyruvate carboxylase activity	1.78E-04
22	GO:0005093: Rab GDP-dissociation inhibitor activity	1.78E-04
23	GO:0016151: nickel cation binding	1.78E-04
24	GO:0004470: malic enzyme activity	3.53E-04
25	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	3.53E-04
26	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	3.53E-04
27	GO:0015210: uracil transmembrane transporter activity	3.53E-04
28	GO:0051538: 3 iron, 4 sulfur cluster binding	4.50E-04
29	GO:0005459: UDP-galactose transmembrane transporter activity	4.50E-04
30	GO:0031369: translation initiation factor binding	5.51E-04
31	GO:0016462: pyrophosphatase activity	5.51E-04
32	GO:0102391: decanoate--CoA ligase activity	6.58E-04
33	GO:0004747: ribokinase activity	6.58E-04
34	GO:0003978: UDP-glucose 4-epimerase activity	6.58E-04
35	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.58E-04
36	GO:0004656: procollagen-proline 4-dioxygenase activity	6.58E-04
37	GO:0004620: phospholipase activity	7.69E-04
38	GO:0004467: long-chain fatty acid-CoA ligase activity	7.69E-04
39	GO:0004427: inorganic diphosphatase activity	7.69E-04
40	GO:0008865: fructokinase activity	8.84E-04
41	GO:0003924: GTPase activity	9.16E-04
42	GO:0047617: acyl-CoA hydrolase activity	1.25E-03
43	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.82E-03
44	GO:0031418: L-ascorbic acid binding	2.46E-03
45	GO:0016787: hydrolase activity	2.54E-03
46	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.80E-03
47	GO:0003727: single-stranded RNA binding	3.33E-03
48	GO:0005525: GTP binding	3.49E-03
49	GO:0047134: protein-disulfide reductase activity	3.52E-03
50	GO:0000287: magnesium ion binding	3.66E-03
51	GO:0050662: coenzyme binding	4.11E-03
52	GO:0004791: thioredoxin-disulfide reductase activity	4.11E-03
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.93E-03
54	GO:0005215: transporter activity	5.16E-03
55	GO:0015250: water channel activity	5.81E-03
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.27E-03
57	GO:0016491: oxidoreductase activity	6.44E-03
58	GO:0004683: calmodulin-dependent protein kinase activity	6.50E-03
59	GO:0005096: GTPase activator activity	7.22E-03
60	GO:0050897: cobalt ion binding	7.72E-03
61	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.23E-03
62	GO:0003697: single-stranded DNA binding	8.23E-03
63	GO:0005524: ATP binding	9.55E-03
64	GO:0051287: NAD binding	1.12E-02
65	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.21E-02
66	GO:0000166: nucleotide binding	1.21E-02
67	GO:0045735: nutrient reservoir activity	1.36E-02
68	GO:0022857: transmembrane transporter activity	1.49E-02
69	GO:0015035: protein disulfide oxidoreductase activity	1.59E-02
70	GO:0004386: helicase activity	1.65E-02
71	GO:0016301: kinase activity	1.88E-02
72	GO:0005509: calcium ion binding	2.26E-02
73	GO:0008270: zinc ion binding	3.74E-02
74	GO:0042803: protein homodimerization activity	4.29E-02
75	GO:0004722: protein serine/threonine phosphatase activity	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000138: Golgi trans cisterna	4.18E-05
3	GO:0031314: extrinsic component of mitochondrial inner membrane	1.04E-04
4	GO:0005829: cytosol	1.53E-04
5	GO:0005794: Golgi apparatus	1.65E-04
6	GO:0030139: endocytic vesicle	1.78E-04
7	GO:0046861: glyoxysomal membrane	1.78E-04
8	GO:0005777: peroxisome	3.40E-04
9	GO:0005771: multivesicular body	5.51E-04
10	GO:0030904: retromer complex	5.51E-04
11	GO:0030173: integral component of Golgi membrane	6.58E-04
12	GO:0031902: late endosome membrane	7.08E-04
13	GO:0005886: plasma membrane	8.24E-04
14	GO:0009514: glyoxysome	1.00E-03
15	GO:0005665: DNA-directed RNA polymerase II, core complex	1.67E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	2.13E-03
17	GO:0005737: cytoplasm	2.19E-03
18	GO:0005769: early endosome	2.29E-03
19	GO:0045271: respiratory chain complex I	2.62E-03
20	GO:0016020: membrane	3.06E-03
21	GO:0005778: peroxisomal membrane	5.36E-03
22	GO:0000932: P-body	5.81E-03
23	GO:0031966: mitochondrial membrane	1.15E-02
24	GO:0000502: proteasome complex	1.21E-02
25	GO:0005747: mitochondrial respiratory chain complex I	1.39E-02
26	GO:0005783: endoplasmic reticulum	1.52E-02
27	GO:0005802: trans-Golgi network	1.94E-02
28	GO:0005759: mitochondrial matrix	2.14E-02
29	GO:0005774: vacuolar membrane	2.19E-02
30	GO:0005768: endosome	2.20E-02
31	GO:0048046: apoplast	2.33E-02
32	GO:0005618: cell wall	2.60E-02
33	GO:0005789: endoplasmic reticulum membrane	3.74E-02
34	GO:0009506: plasmodesma	3.90E-02
35	GO:0005730: nucleolus	4.13E-02
36	GO:0005743: mitochondrial inner membrane	4.57E-02
37	GO:0009570: chloroplast stroma	4.83E-02