co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
2	GO:0044376: RNA polymerase II complex import to nucleus	1.39E-05
3	GO:1900424: regulation of defense response to bacterium	1.39E-05
4	GO:1903648: positive regulation of chlorophyll catabolic process	1.39E-05
5	GO:1990022: RNA polymerase III complex localization to nucleus	1.39E-05
6	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.65E-05
7	GO:0042853: L-alanine catabolic process	3.65E-05
8	GO:0010253: UDP-rhamnose biosynthetic process	6.55E-05
9	GO:0048577: negative regulation of short-day photoperiodism, flowering	9.94E-05
10	GO:0009165: nucleotide biosynthetic process	1.37E-04
11	GO:0010315: auxin efflux	2.22E-04
12	GO:1900057: positive regulation of leaf senescence	3.15E-04
13	GO:0006401: RNA catabolic process	3.15E-04
14	GO:0006744: ubiquinone biosynthetic process	3.15E-04
15	GO:0030968: endoplasmic reticulum unfolded protein response	4.16E-04
16	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.68E-04
17	GO:0009058: biosynthetic process	5.00E-04
18	GO:0009790: embryo development	5.51E-04
19	GO:0051555: flavonol biosynthetic process	5.78E-04
20	GO:0034605: cellular response to heat	8.13E-04
21	GO:0009225: nucleotide-sugar metabolic process	8.75E-04
22	GO:0000162: tryptophan biosynthetic process	9.38E-04
23	GO:0009116: nucleoside metabolic process	1.00E-03
24	GO:0030150: protein import into mitochondrial matrix	1.00E-03
25	GO:0008299: isoprenoid biosynthetic process	1.07E-03
26	GO:0030433: ubiquitin-dependent ERAD pathway	1.20E-03
27	GO:0009411: response to UV	1.27E-03
28	GO:0042127: regulation of cell proliferation	1.34E-03
29	GO:0010118: stomatal movement	1.49E-03
30	GO:0016032: viral process	1.88E-03
31	GO:0001666: response to hypoxia	2.30E-03
32	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.39E-03
33	GO:0009910: negative regulation of flower development	3.03E-03
34	GO:0051707: response to other organism	3.83E-03
35	GO:0000209: protein polyubiquitination	3.93E-03
36	GO:0000165: MAPK cascade	4.36E-03
37	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.36E-03
38	GO:0009414: response to water deprivation	6.01E-03
39	GO:0071555: cell wall organization	6.16E-03
40	GO:0010150: leaf senescence	8.74E-03
41	GO:0006470: protein dephosphorylation	9.60E-03
42	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.13E-02
43	GO:0009658: chloroplast organization	1.19E-02
44	GO:0007275: multicellular organism development	1.21E-02
45	GO:0016042: lipid catabolic process	1.79E-02
46	GO:0006629: lipid metabolic process	1.82E-02
47	GO:0009908: flower development	2.55E-02
48	GO:0009738: abscisic acid-activated signaling pathway	2.68E-02
49	GO:0009555: pollen development	2.74E-02
50	GO:0051301: cell division	2.92E-02
51	GO:0045893: positive regulation of transcription, DNA-templated	3.03E-02
52	GO:0006457: protein folding	3.30E-02
53	GO:0042742: defense response to bacterium	4.54E-02
54	GO:0030154: cell differentiation	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:1990381: ubiquitin-specific protease binding	1.39E-05
3	GO:0008460: dTDP-glucose 4,6-dehydratase activity	3.65E-05
4	GO:0010280: UDP-L-rhamnose synthase activity	3.65E-05
5	GO:0050347: trans-octaprenyltranstransferase activity	3.65E-05
6	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.65E-05
7	GO:0000774: adenyl-nucleotide exchange factor activity	3.65E-05
8	GO:0050377: UDP-glucose 4,6-dehydratase activity	3.65E-05
9	GO:0000975: regulatory region DNA binding	6.55E-05
10	GO:0004749: ribose phosphate diphosphokinase activity	9.94E-05
11	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	9.94E-05
12	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.37E-04
13	GO:0004659: prenyltransferase activity	1.37E-04
14	GO:0004834: tryptophan synthase activity	1.37E-04
15	GO:0047714: galactolipase activity	2.22E-04
16	GO:0051082: unfolded protein binding	3.81E-04
17	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.16E-04
18	GO:0030170: pyridoxal phosphate binding	5.25E-04
19	GO:0004161: dimethylallyltranstransferase activity	6.34E-04
20	GO:0004725: protein tyrosine phosphatase activity	9.38E-04
21	GO:0051087: chaperone binding	1.07E-03
22	GO:0042803: protein homodimerization activity	1.49E-03
23	GO:0016853: isomerase activity	1.64E-03
24	GO:0004518: nuclease activity	1.88E-03
25	GO:0004721: phosphoprotein phosphatase activity	2.57E-03
26	GO:0004806: triglyceride lipase activity	2.57E-03
27	GO:0005507: copper ion binding	4.34E-03
28	GO:0004650: polygalacturonase activity	5.62E-03
29	GO:0016829: lyase activity	7.38E-03
30	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.64E-03
31	GO:0003729: mRNA binding	9.16E-03
32	GO:0000287: magnesium ion binding	1.17E-02
33	GO:0004722: protein serine/threonine phosphatase activity	1.68E-02
34	GO:0003924: GTPase activity	1.82E-02
35	GO:0016740: transferase activity	3.16E-02
36	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.95E-02
37	GO:0044212: transcription regulatory region DNA binding	4.54E-02
38	GO:0003824: catalytic activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0033106: cis-Golgi network membrane	0.00E+00
2	GO:0000836: Hrd1p ubiquitin ligase complex	1.39E-05
3	GO:0044322: endoplasmic reticulum quality control compartment	1.39E-05
4	GO:0001405: presequence translocase-associated import motor	1.39E-05
5	GO:0036513: Derlin-1 retrotranslocation complex	9.94E-05
6	GO:0005759: mitochondrial matrix	8.19E-03
7	GO:0005874: microtubule	1.35E-02
8	GO:0009507: chloroplast	1.98E-02