Gene: AT5G52470
     

Gene description


TAIR ID: AT5G52470

Short description: fibrillarin 1

Pathogen responsiveness: -1.89

General responsiveness: -1.42

Orthologous


Rice:

OS05G0176000   OS02G0821800  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA methylation, rRNA processing, transcription, DNA-templated, histone glutamine methylation, box C/D snoRNA 3'-end processing, regulation of transcription, rRNA methylation, tRNA processing


GO cellular component


box C/D snoRNP complex, small-subunit processome, nucleus, membrane, nucleolus, Cajal body


GO molecular function


rRNA methyltransferase activity, histone-glutamine methyltransferase activity, RNA binding


Protein domain


PfamPF01269, Fibrillarin
SMARTSM01206, Fibrillarin

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G18770, AT3G27920

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.841.60E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.606.18E-07






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