GO Enrichment Analysis of Co-expressed Genes with
AT5G52470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 2 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 6 | GO:0071433: cell wall repair | 0.00E+00 |
| 7 | GO:0006412: translation | 8.80E-27 |
| 8 | GO:0042254: ribosome biogenesis | 1.21E-09 |
| 9 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.16E-07 |
| 10 | GO:0046686: response to cadmium ion | 9.24E-07 |
| 11 | GO:0002181: cytoplasmic translation | 1.58E-06 |
| 12 | GO:0006626: protein targeting to mitochondrion | 3.21E-06 |
| 13 | GO:0000027: ribosomal large subunit assembly | 7.18E-06 |
| 14 | GO:0007005: mitochondrion organization | 1.18E-05 |
| 15 | GO:0000470: maturation of LSU-rRNA | 1.83E-05 |
| 16 | GO:0009651: response to salt stress | 1.88E-05 |
| 17 | GO:0009955: adaxial/abaxial pattern specification | 2.61E-05 |
| 18 | GO:2000232: regulation of rRNA processing | 8.78E-05 |
| 19 | GO:1990258: histone glutamine methylation | 8.78E-05 |
| 20 | GO:0031120: snRNA pseudouridine synthesis | 8.78E-05 |
| 21 | GO:0031118: rRNA pseudouridine synthesis | 8.78E-05 |
| 22 | GO:0000494: box C/D snoRNA 3'-end processing | 8.78E-05 |
| 23 | GO:0006820: anion transport | 1.46E-04 |
| 24 | GO:0010220: positive regulation of vernalization response | 2.08E-04 |
| 25 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.08E-04 |
| 26 | GO:0048569: post-embryonic animal organ development | 2.08E-04 |
| 27 | GO:0055129: L-proline biosynthetic process | 2.08E-04 |
| 28 | GO:0008652: cellular amino acid biosynthetic process | 3.48E-04 |
| 29 | GO:0055074: calcium ion homeostasis | 3.48E-04 |
| 30 | GO:1902626: assembly of large subunit precursor of preribosome | 3.48E-04 |
| 31 | GO:0006241: CTP biosynthetic process | 5.01E-04 |
| 32 | GO:0006165: nucleoside diphosphate phosphorylation | 5.01E-04 |
| 33 | GO:0006228: UTP biosynthetic process | 5.01E-04 |
| 34 | GO:0015696: ammonium transport | 5.01E-04 |
| 35 | GO:0007004: telomere maintenance via telomerase | 5.01E-04 |
| 36 | GO:0070301: cellular response to hydrogen peroxide | 5.01E-04 |
| 37 | GO:0010197: polar nucleus fusion | 5.37E-04 |
| 38 | GO:0006183: GTP biosynthetic process | 6.66E-04 |
| 39 | GO:0072488: ammonium transmembrane transport | 6.66E-04 |
| 40 | GO:0000460: maturation of 5.8S rRNA | 6.66E-04 |
| 41 | GO:0044205: 'de novo' UMP biosynthetic process | 6.66E-04 |
| 42 | GO:0071493: cellular response to UV-B | 8.44E-04 |
| 43 | GO:0031167: rRNA methylation | 8.44E-04 |
| 44 | GO:0031365: N-terminal protein amino acid modification | 8.44E-04 |
| 45 | GO:0009793: embryo development ending in seed dormancy | 8.73E-04 |
| 46 | GO:0006561: proline biosynthetic process | 1.03E-03 |
| 47 | GO:0009423: chorismate biosynthetic process | 1.23E-03 |
| 48 | GO:0009088: threonine biosynthetic process | 1.23E-03 |
| 49 | GO:0010043: response to zinc ion | 1.39E-03 |
| 50 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.44E-03 |
| 51 | GO:0042255: ribosome assembly | 1.66E-03 |
| 52 | GO:0001522: pseudouridine synthesis | 1.66E-03 |
| 53 | GO:0001510: RNA methylation | 1.89E-03 |
| 54 | GO:0006189: 'de novo' IMP biosynthetic process | 2.14E-03 |
| 55 | GO:0098656: anion transmembrane transport | 2.14E-03 |
| 56 | GO:0006364: rRNA processing | 2.61E-03 |
| 57 | GO:0010162: seed dormancy process | 2.65E-03 |
| 58 | GO:0006913: nucleocytoplasmic transport | 2.93E-03 |
| 59 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.93E-03 |
| 60 | GO:0009073: aromatic amino acid family biosynthetic process | 2.93E-03 |
| 61 | GO:0016485: protein processing | 2.93E-03 |
| 62 | GO:0048467: gynoecium development | 3.80E-03 |
| 63 | GO:0030150: protein import into mitochondrial matrix | 4.74E-03 |
| 64 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.74E-03 |
| 65 | GO:0015031: protein transport | 5.15E-03 |
| 66 | GO:0015992: proton transport | 5.42E-03 |
| 67 | GO:0006334: nucleosome assembly | 5.42E-03 |
| 68 | GO:0009735: response to cytokinin | 5.75E-03 |
| 69 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.76E-03 |
| 70 | GO:0009294: DNA mediated transformation | 6.12E-03 |
| 71 | GO:0008033: tRNA processing | 7.24E-03 |
| 72 | GO:0006520: cellular amino acid metabolic process | 7.62E-03 |
| 73 | GO:0080156: mitochondrial mRNA modification | 8.83E-03 |
| 74 | GO:0006635: fatty acid beta-oxidation | 8.83E-03 |
| 75 | GO:0006457: protein folding | 8.94E-03 |
| 76 | GO:0032502: developmental process | 9.24E-03 |
| 77 | GO:0016049: cell growth | 1.33E-02 |
| 78 | GO:0006811: ion transport | 1.48E-02 |
| 79 | GO:0048527: lateral root development | 1.53E-02 |
| 80 | GO:0009408: response to heat | 1.81E-02 |
| 81 | GO:0000154: rRNA modification | 2.12E-02 |
| 82 | GO:0009909: regulation of flower development | 2.60E-02 |
| 83 | GO:0016569: covalent chromatin modification | 2.97E-02 |
| 84 | GO:0009624: response to nematode | 3.10E-02 |
| 85 | GO:0006413: translational initiation | 4.35E-02 |
| 86 | GO:0016036: cellular response to phosphate starvation | 4.35E-02 |
| 87 | GO:0009451: RNA modification | 4.65E-02 |
| 88 | GO:0006414: translational elongation | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 2 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 3 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 4 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 5 | GO:0003735: structural constituent of ribosome | 5.40E-34 |
| 6 | GO:0003729: mRNA binding | 6.10E-08 |
| 7 | GO:0030515: snoRNA binding | 2.46E-07 |
| 8 | GO:0003723: RNA binding | 2.82E-07 |
| 9 | GO:0015288: porin activity | 4.65E-05 |
| 10 | GO:0008308: voltage-gated anion channel activity | 5.90E-05 |
| 11 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 8.78E-05 |
| 12 | GO:1990259: histone-glutamine methyltransferase activity | 8.78E-05 |
| 13 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 8.78E-05 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.79E-05 |
| 15 | GO:0003746: translation elongation factor activity | 1.24E-04 |
| 16 | GO:0016743: carboxyl- or carbamoyltransferase activity | 2.08E-04 |
| 17 | GO:0043021: ribonucleoprotein complex binding | 2.08E-04 |
| 18 | GO:0070034: telomerase RNA binding | 2.08E-04 |
| 19 | GO:0008649: rRNA methyltransferase activity | 3.48E-04 |
| 20 | GO:0070180: large ribosomal subunit rRNA binding | 3.48E-04 |
| 21 | GO:0008469: histone-arginine N-methyltransferase activity | 3.48E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 5.01E-04 |
| 23 | GO:0004072: aspartate kinase activity | 5.01E-04 |
| 24 | GO:0008276: protein methyltransferase activity | 5.01E-04 |
| 25 | GO:0016597: amino acid binding | 8.88E-04 |
| 26 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.03E-03 |
| 27 | GO:0008519: ammonium transmembrane transporter activity | 1.03E-03 |
| 28 | GO:0004017: adenylate kinase activity | 1.23E-03 |
| 29 | GO:0008235: metalloexopeptidase activity | 1.44E-03 |
| 30 | GO:0008135: translation factor activity, RNA binding | 1.89E-03 |
| 31 | GO:0004177: aminopeptidase activity | 2.93E-03 |
| 32 | GO:0015266: protein channel activity | 3.50E-03 |
| 33 | GO:0051082: unfolded protein binding | 3.69E-03 |
| 34 | GO:0019843: rRNA binding | 4.61E-03 |
| 35 | GO:0005528: FK506 binding | 4.74E-03 |
| 36 | GO:0004407: histone deacetylase activity | 4.74E-03 |
| 37 | GO:0005515: protein binding | 7.14E-03 |
| 38 | GO:0003713: transcription coactivator activity | 7.62E-03 |
| 39 | GO:0010181: FMN binding | 8.02E-03 |
| 40 | GO:0005507: copper ion binding | 1.01E-02 |
| 41 | GO:0050897: cobalt ion binding | 1.53E-02 |
| 42 | GO:0003697: single-stranded DNA binding | 1.63E-02 |
| 43 | GO:0042393: histone binding | 1.79E-02 |
| 44 | GO:0003924: GTPase activity | 1.81E-02 |
| 45 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.18E-02 |
| 46 | GO:0000166: nucleotide binding | 3.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 2.27E-28 |
| 4 | GO:0022626: cytosolic ribosome | 7.39E-28 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 4.35E-26 |
| 6 | GO:0005840: ribosome | 1.30E-19 |
| 7 | GO:0005829: cytosol | 1.31E-14 |
| 8 | GO:0005774: vacuolar membrane | 1.48E-11 |
| 9 | GO:0015934: large ribosomal subunit | 2.11E-11 |
| 10 | GO:0009506: plasmodesma | 1.85E-10 |
| 11 | GO:0005773: vacuole | 3.07E-09 |
| 12 | GO:0022627: cytosolic small ribosomal subunit | 1.92E-08 |
| 13 | GO:0005737: cytoplasm | 1.10E-07 |
| 14 | GO:0070545: PeBoW complex | 4.16E-07 |
| 15 | GO:0031428: box C/D snoRNP complex | 1.83E-05 |
| 16 | GO:0005742: mitochondrial outer membrane translocase complex | 5.90E-05 |
| 17 | GO:0046930: pore complex | 5.90E-05 |
| 18 | GO:0015030: Cajal body | 8.90E-05 |
| 19 | GO:0032040: small-subunit processome | 1.46E-04 |
| 20 | GO:0005758: mitochondrial intermembrane space | 2.70E-04 |
| 21 | GO:0005741: mitochondrial outer membrane | 3.29E-04 |
| 22 | GO:0005739: mitochondrion | 3.40E-04 |
| 23 | GO:0031429: box H/ACA snoRNP complex | 5.01E-04 |
| 24 | GO:0016592: mediator complex | 7.02E-04 |
| 25 | GO:0005618: cell wall | 7.09E-04 |
| 26 | GO:0005788: endoplasmic reticulum lumen | 9.88E-04 |
| 27 | GO:0005762: mitochondrial large ribosomal subunit | 1.23E-03 |
| 28 | GO:0016020: membrane | 1.41E-03 |
| 29 | GO:0030687: preribosome, large subunit precursor | 1.44E-03 |
| 30 | GO:0005743: mitochondrial inner membrane | 2.84E-03 |
| 31 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.93E-03 |
| 32 | GO:0005747: mitochondrial respiratory chain complex I | 3.17E-03 |
| 33 | GO:0009507: chloroplast | 3.80E-03 |
| 34 | GO:0005654: nucleoplasm | 4.49E-03 |
| 35 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.08E-02 |
| 36 | GO:0005886: plasma membrane | 2.20E-02 |
| 37 | GO:0005635: nuclear envelope | 2.53E-02 |
| 38 | GO:0005834: heterotrimeric G-protein complex | 2.84E-02 |
| 39 | GO:0005759: mitochondrial matrix | 4.28E-02 |