GO Enrichment Analysis of Co-expressed Genes with
AT5G52470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045041: protein import into mitochondrial intermembrane space | 0.00E+00 |
| 2 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0046686: response to cadmium ion | 8.47E-13 |
| 6 | GO:0006458: 'de novo' protein folding | 2.52E-08 |
| 7 | GO:0042026: protein refolding | 2.52E-08 |
| 8 | GO:0042254: ribosome biogenesis | 4.16E-08 |
| 9 | GO:0006334: nucleosome assembly | 1.87E-06 |
| 10 | GO:0061077: chaperone-mediated protein folding | 1.87E-06 |
| 11 | GO:0006457: protein folding | 3.23E-06 |
| 12 | GO:0016444: somatic cell DNA recombination | 7.76E-06 |
| 13 | GO:0031120: snRNA pseudouridine synthesis | 4.18E-05 |
| 14 | GO:0031118: rRNA pseudouridine synthesis | 4.18E-05 |
| 15 | GO:0000494: box C/D snoRNA 3'-end processing | 4.18E-05 |
| 16 | GO:1990258: histone glutamine methylation | 4.18E-05 |
| 17 | GO:0000027: ribosomal large subunit assembly | 9.57E-05 |
| 18 | GO:0045905: positive regulation of translational termination | 1.04E-04 |
| 19 | GO:0045901: positive regulation of translational elongation | 1.04E-04 |
| 20 | GO:0006452: translational frameshifting | 1.04E-04 |
| 21 | GO:0007005: mitochondrion organization | 1.31E-04 |
| 22 | GO:0009294: DNA mediated transformation | 1.45E-04 |
| 23 | GO:0006954: inflammatory response | 1.78E-04 |
| 24 | GO:1902626: assembly of large subunit precursor of preribosome | 1.78E-04 |
| 25 | GO:0000413: protein peptidyl-prolyl isomerization | 1.88E-04 |
| 26 | GO:0006986: response to unfolded protein | 2.63E-04 |
| 27 | GO:0007004: telomere maintenance via telomerase | 2.63E-04 |
| 28 | GO:0070301: cellular response to hydrogen peroxide | 2.63E-04 |
| 29 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.63E-04 |
| 30 | GO:0006241: CTP biosynthetic process | 2.63E-04 |
| 31 | GO:0006165: nucleoside diphosphate phosphorylation | 2.63E-04 |
| 32 | GO:0006228: UTP biosynthetic process | 2.63E-04 |
| 33 | GO:0051131: chaperone-mediated protein complex assembly | 2.63E-04 |
| 34 | GO:0006183: GTP biosynthetic process | 3.53E-04 |
| 35 | GO:0031365: N-terminal protein amino acid modification | 4.50E-04 |
| 36 | GO:0031167: rRNA methylation | 4.50E-04 |
| 37 | GO:0000724: double-strand break repair via homologous recombination | 5.75E-04 |
| 38 | GO:0006412: translation | 5.99E-04 |
| 39 | GO:0009423: chorismate biosynthetic process | 6.58E-04 |
| 40 | GO:0001522: pseudouridine synthesis | 8.84E-04 |
| 41 | GO:0042255: ribosome assembly | 8.84E-04 |
| 42 | GO:0009408: response to heat | 9.16E-04 |
| 43 | GO:0001510: RNA methylation | 1.00E-03 |
| 44 | GO:0006364: rRNA processing | 1.01E-03 |
| 45 | GO:0006189: 'de novo' IMP biosynthetic process | 1.13E-03 |
| 46 | GO:0098656: anion transmembrane transport | 1.13E-03 |
| 47 | GO:0009651: response to salt stress | 1.14E-03 |
| 48 | GO:0016573: histone acetylation | 1.25E-03 |
| 49 | GO:0090332: stomatal closure | 1.25E-03 |
| 50 | GO:0010162: seed dormancy process | 1.39E-03 |
| 51 | GO:0009073: aromatic amino acid family biosynthetic process | 1.53E-03 |
| 52 | GO:0016485: protein processing | 1.53E-03 |
| 53 | GO:0012501: programmed cell death | 1.67E-03 |
| 54 | GO:0006820: anion transport | 1.67E-03 |
| 55 | GO:0048467: gynoecium development | 1.97E-03 |
| 56 | GO:0006541: glutamine metabolic process | 1.97E-03 |
| 57 | GO:0006413: translational initiation | 2.26E-03 |
| 58 | GO:0034976: response to endoplasmic reticulum stress | 2.29E-03 |
| 59 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.46E-03 |
| 60 | GO:0010187: negative regulation of seed germination | 2.46E-03 |
| 61 | GO:0015992: proton transport | 2.80E-03 |
| 62 | GO:0098542: defense response to other organism | 2.80E-03 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 2.86E-03 |
| 64 | GO:0009617: response to bacterium | 2.88E-03 |
| 65 | GO:0008033: tRNA processing | 3.71E-03 |
| 66 | GO:0010197: polar nucleus fusion | 3.91E-03 |
| 67 | GO:0048868: pollen tube development | 3.91E-03 |
| 68 | GO:0009567: double fertilization forming a zygote and endosperm | 5.15E-03 |
| 69 | GO:0009615: response to virus | 5.81E-03 |
| 70 | GO:0016049: cell growth | 6.74E-03 |
| 71 | GO:0010311: lateral root formation | 7.22E-03 |
| 72 | GO:0048527: lateral root development | 7.72E-03 |
| 73 | GO:0009853: photorespiration | 8.23E-03 |
| 74 | GO:0006839: mitochondrial transport | 9.01E-03 |
| 75 | GO:0008283: cell proliferation | 9.82E-03 |
| 76 | GO:0000154: rRNA modification | 1.07E-02 |
| 77 | GO:0009735: response to cytokinin | 1.10E-02 |
| 78 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.24E-02 |
| 79 | GO:0016569: covalent chromatin modification | 1.49E-02 |
| 80 | GO:0009553: embryo sac development | 1.52E-02 |
| 81 | GO:0009451: RNA modification | 2.33E-02 |
| 82 | GO:0042742: defense response to bacterium | 2.45E-02 |
| 83 | GO:0009723: response to ethylene | 3.47E-02 |
| 84 | GO:0045454: cell redox homeostasis | 4.15E-02 |
| 85 | GO:0006281: DNA repair | 4.81E-02 |
| 86 | GO:0048364: root development | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 2 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 3 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 4 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 5 | GO:0030515: snoRNA binding | 4.16E-08 |
| 6 | GO:0051082: unfolded protein binding | 9.77E-08 |
| 7 | GO:0044183: protein binding involved in protein folding | 3.43E-07 |
| 8 | GO:0003735: structural constituent of ribosome | 7.38E-06 |
| 9 | GO:0042393: histone binding | 3.49E-05 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 4.18E-05 |
| 11 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 4.18E-05 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.39E-05 |
| 13 | GO:0003723: RNA binding | 6.59E-05 |
| 14 | GO:0070034: telomerase RNA binding | 1.04E-04 |
| 15 | GO:0008649: rRNA methyltransferase activity | 1.78E-04 |
| 16 | GO:0070180: large ribosomal subunit rRNA binding | 1.78E-04 |
| 17 | GO:0004550: nucleoside diphosphate kinase activity | 2.63E-04 |
| 18 | GO:0002020: protease binding | 4.50E-04 |
| 19 | GO:0005507: copper ion binding | 4.76E-04 |
| 20 | GO:0016462: pyrophosphatase activity | 5.51E-04 |
| 21 | GO:0003746: translation elongation factor activity | 6.01E-04 |
| 22 | GO:0008235: metalloexopeptidase activity | 7.69E-04 |
| 23 | GO:0043022: ribosome binding | 8.84E-04 |
| 24 | GO:0015288: porin activity | 8.84E-04 |
| 25 | GO:0008308: voltage-gated anion channel activity | 1.00E-03 |
| 26 | GO:0001055: RNA polymerase II activity | 1.25E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 1.53E-03 |
| 28 | GO:0004177: aminopeptidase activity | 1.53E-03 |
| 29 | GO:0001056: RNA polymerase III activity | 1.67E-03 |
| 30 | GO:0015114: phosphate ion transmembrane transporter activity | 1.82E-03 |
| 31 | GO:0004407: histone deacetylase activity | 2.46E-03 |
| 32 | GO:0005528: FK506 binding | 2.46E-03 |
| 33 | GO:0051087: chaperone binding | 2.62E-03 |
| 34 | GO:0004298: threonine-type endopeptidase activity | 2.80E-03 |
| 35 | GO:0003743: translation initiation factor activity | 2.82E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 3.33E-03 |
| 37 | GO:0016853: isomerase activity | 4.11E-03 |
| 38 | GO:0010181: FMN binding | 4.11E-03 |
| 39 | GO:0050897: cobalt ion binding | 7.72E-03 |
| 40 | GO:0005524: ATP binding | 9.55E-03 |
| 41 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.21E-02 |
| 42 | GO:0042802: identical protein binding | 2.72E-02 |
| 43 | GO:0003682: chromatin binding | 3.26E-02 |
| 44 | GO:0008233: peptidase activity | 3.60E-02 |
| 45 | GO:0003729: mRNA binding | 3.64E-02 |
| 46 | GO:0003924: GTPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 2 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 1.50E-15 |
| 4 | GO:0005774: vacuolar membrane | 4.19E-12 |
| 5 | GO:0005829: cytosol | 3.79E-10 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 2.74E-06 |
| 7 | GO:0005747: mitochondrial respiratory chain complex I | 3.14E-06 |
| 8 | GO:0031428: box C/D snoRNP complex | 5.34E-06 |
| 9 | GO:0022626: cytosolic ribosome | 2.33E-05 |
| 10 | GO:0015030: Cajal body | 2.88E-05 |
| 11 | GO:0005739: mitochondrion | 3.32E-05 |
| 12 | GO:0032040: small-subunit processome | 4.90E-05 |
| 13 | GO:0035267: NuA4 histone acetyltransferase complex | 1.04E-04 |
| 14 | GO:0005773: vacuole | 1.29E-04 |
| 15 | GO:0005840: ribosome | 1.34E-04 |
| 16 | GO:0005759: mitochondrial matrix | 2.14E-04 |
| 17 | GO:0031429: box H/ACA snoRNP complex | 2.63E-04 |
| 18 | GO:0005618: cell wall | 3.42E-04 |
| 19 | GO:0005762: mitochondrial large ribosomal subunit | 6.58E-04 |
| 20 | GO:0046930: pore complex | 1.00E-03 |
| 21 | GO:0005742: mitochondrial outer membrane translocase complex | 1.00E-03 |
| 22 | GO:0009536: plastid | 1.10E-03 |
| 23 | GO:0005736: DNA-directed RNA polymerase I complex | 1.13E-03 |
| 24 | GO:0005666: DNA-directed RNA polymerase III complex | 1.25E-03 |
| 25 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.39E-03 |
| 26 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.53E-03 |
| 27 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.67E-03 |
| 28 | GO:0005737: cytoplasm | 2.19E-03 |
| 29 | GO:0045271: respiratory chain complex I | 2.62E-03 |
| 30 | GO:0005741: mitochondrial outer membrane | 2.80E-03 |
| 31 | GO:0005839: proteasome core complex | 2.80E-03 |
| 32 | GO:0016592: mediator complex | 4.72E-03 |
| 33 | GO:0015934: large ribosomal subunit | 7.72E-03 |
| 34 | GO:0031966: mitochondrial membrane | 1.15E-02 |
| 35 | GO:0000502: proteasome complex | 1.21E-02 |
| 36 | GO:0009506: plasmodesma | 1.25E-02 |
| 37 | GO:0048046: apoplast | 2.33E-02 |
| 38 | GO:0009505: plant-type cell wall | 3.07E-02 |
| 39 | GO:0009941: chloroplast envelope | 3.21E-02 |
| 40 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.34E-02 |
| 41 | GO:0009507: chloroplast | 3.71E-02 |
| 42 | GO:0005886: plasma membrane | 4.29E-02 |
| 43 | GO:0005743: mitochondrial inner membrane | 4.57E-02 |
| 44 | GO:0009570: chloroplast stroma | 4.83E-02 |