Gene: AT5G48460
     

Gene description


TAIR ID: AT5G48460

Short description: Actin binding Calponin homology (CH) domain-containing protein

Pathogen responsiveness: 0.08

General responsiveness: -0.19

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


actin filament network formation, actin crosslink formation, actin filament bundle assembly


GO cellular component


actin filament bundle, cytoplasm, actin filament


GO molecular function


actin filament binding


Protein domain


PfamPF00307, Calponin homology (CH) domain
SMARTSM00033, CH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT4G18770, AT4G34680, AT2G45050, AT3G60530, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.333.25E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.565.91E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.791.23E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.214.55E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.547.84E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.382.73E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.762.88E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.763.16E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.214.07E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.641.46E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.612.65E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.111.37E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.043.90E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.594.59E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.061.72E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-1.957.25E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.722.17E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h-2.125.72E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.365.68E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-1.659.51E-03






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