co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000372: Group I intron splicing	0.00E+00
2	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
3	GO:0090706: specification of plant organ position	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
6	GO:0009583: detection of light stimulus	0.00E+00
7	GO:1905177: tracheary element differentiation	0.00E+00
8	GO:0006907: pinocytosis	0.00E+00
9	GO:0007638: mechanosensory behavior	0.00E+00
10	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
11	GO:0006399: tRNA metabolic process	0.00E+00
12	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
13	GO:0006114: glycerol biosynthetic process	0.00E+00
14	GO:0070125: mitochondrial translational elongation	0.00E+00
15	GO:0045176: apical protein localization	0.00E+00
16	GO:0070979: protein K11-linked ubiquitination	0.00E+00
17	GO:0071000: response to magnetism	0.00E+00
18	GO:0000373: Group II intron splicing	5.57E-07
19	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.59E-05
20	GO:0010158: abaxial cell fate specification	3.25E-05
21	GO:0009793: embryo development ending in seed dormancy	6.01E-05
22	GO:0000105: histidine biosynthetic process	1.94E-04
23	GO:0046620: regulation of organ growth	1.94E-04
24	GO:0009451: RNA modification	2.57E-04
25	GO:0009733: response to auxin	2.61E-04
26	GO:0009926: auxin polar transport	2.67E-04
27	GO:0010239: chloroplast mRNA processing	3.20E-04
28	GO:0009734: auxin-activated signaling pathway	3.52E-04
29	GO:1900865: chloroplast RNA modification	4.27E-04
30	GO:0016117: carotenoid biosynthetic process	5.30E-04
31	GO:0045037: protein import into chloroplast stroma	7.68E-04
32	GO:0010582: floral meristem determinacy	7.68E-04
33	GO:1902183: regulation of shoot apical meristem development	7.68E-04
34	GO:0016123: xanthophyll biosynthetic process	7.68E-04
35	GO:0040008: regulation of growth	8.16E-04
36	GO:0010583: response to cyclopentenone	1.04E-03
37	GO:0016554: cytidine to uridine editing	1.06E-03
38	GO:0010207: photosystem II assembly	1.06E-03
39	GO:0043489: RNA stabilization	1.16E-03
40	GO:0043266: regulation of potassium ion transport	1.16E-03
41	GO:0010080: regulation of floral meristem growth	1.16E-03
42	GO:0072387: flavin adenine dinucleotide metabolic process	1.16E-03
43	GO:0006438: valyl-tRNA aminoacylation	1.16E-03
44	GO:0043087: regulation of GTPase activity	1.16E-03
45	GO:2000021: regulation of ion homeostasis	1.16E-03
46	GO:0043609: regulation of carbon utilization	1.16E-03
47	GO:0006436: tryptophanyl-tRNA aminoacylation	1.16E-03
48	GO:0051247: positive regulation of protein metabolic process	1.16E-03
49	GO:1902025: nitrate import	1.16E-03
50	GO:0090548: response to nitrate starvation	1.16E-03
51	GO:0000066: mitochondrial ornithine transport	1.16E-03
52	GO:1902458: positive regulation of stomatal opening	1.16E-03
53	GO:0015904: tetracycline transport	1.16E-03
54	GO:2000905: negative regulation of starch metabolic process	1.16E-03
55	GO:0010450: inflorescence meristem growth	1.16E-03
56	GO:0034757: negative regulation of iron ion transport	1.16E-03
57	GO:0009090: homoserine biosynthetic process	1.16E-03
58	GO:0070509: calcium ion import	1.16E-03
59	GO:0006419: alanyl-tRNA aminoacylation	1.16E-03
60	GO:0005992: trehalose biosynthetic process	1.62E-03
61	GO:0051510: regulation of unidimensional cell growth	1.79E-03
62	GO:0048564: photosystem I assembly	2.24E-03
63	GO:2000070: regulation of response to water deprivation	2.24E-03
64	GO:0006353: DNA-templated transcription, termination	2.24E-03
65	GO:0009658: chloroplast organization	2.39E-03
66	GO:0010271: regulation of chlorophyll catabolic process	2.56E-03
67	GO:1901959: positive regulation of cutin biosynthetic process	2.56E-03
68	GO:0006432: phenylalanyl-tRNA aminoacylation	2.56E-03
69	GO:1901529: positive regulation of anion channel activity	2.56E-03
70	GO:0099402: plant organ development	2.56E-03
71	GO:0060359: response to ammonium ion	2.56E-03
72	GO:0048255: mRNA stabilization	2.56E-03
73	GO:0010569: regulation of double-strand break repair via homologous recombination	2.56E-03
74	GO:0001736: establishment of planar polarity	2.56E-03
75	GO:0080009: mRNA methylation	2.56E-03
76	GO:0009786: regulation of asymmetric cell division	2.56E-03
77	GO:0006435: threonyl-tRNA aminoacylation	2.56E-03
78	GO:1903426: regulation of reactive oxygen species biosynthetic process	2.56E-03
79	GO:2000123: positive regulation of stomatal complex development	2.56E-03
80	GO:0010024: phytochromobilin biosynthetic process	2.56E-03
81	GO:0010343: singlet oxygen-mediated programmed cell death	2.56E-03
82	GO:1900871: chloroplast mRNA modification	2.56E-03
83	GO:0010617: circadian regulation of calcium ion oscillation	2.56E-03
84	GO:0071482: cellular response to light stimulus	2.75E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	2.75E-03
86	GO:0009657: plastid organization	2.75E-03
87	GO:0048507: meristem development	3.31E-03
88	GO:2000024: regulation of leaf development	3.31E-03
89	GO:0010087: phloem or xylem histogenesis	3.61E-03
90	GO:0010305: leaf vascular tissue pattern formation	3.98E-03
91	GO:0009958: positive gravitropism	3.98E-03
92	GO:0031145: anaphase-promoting complex-dependent catabolic process	4.26E-03
93	GO:1902448: positive regulation of shade avoidance	4.26E-03
94	GO:0010623: programmed cell death involved in cell development	4.26E-03
95	GO:0080055: low-affinity nitrate transport	4.26E-03
96	GO:0006000: fructose metabolic process	4.26E-03
97	GO:0006696: ergosterol biosynthetic process	4.26E-03
98	GO:0090153: regulation of sphingolipid biosynthetic process	4.26E-03
99	GO:0010022: meristem determinacy	4.26E-03
100	GO:0043157: response to cation stress	4.26E-03
101	GO:0071398: cellular response to fatty acid	4.26E-03
102	GO:1901672: positive regulation of systemic acquired resistance	4.26E-03
103	GO:0045165: cell fate commitment	4.26E-03
104	GO:0030029: actin filament-based process	4.26E-03
105	GO:1904278: positive regulation of wax biosynthetic process	4.26E-03
106	GO:0080117: secondary growth	4.26E-03
107	GO:0048586: regulation of long-day photoperiodism, flowering	4.26E-03
108	GO:0045910: negative regulation of DNA recombination	4.26E-03
109	GO:0048829: root cap development	4.61E-03
110	GO:0009416: response to light stimulus	4.95E-03
111	GO:1901332: negative regulation of lateral root development	6.23E-03
112	GO:0034059: response to anoxia	6.23E-03
113	GO:2000904: regulation of starch metabolic process	6.23E-03
114	GO:0044211: CTP salvage	6.23E-03
115	GO:0019048: modulation by virus of host morphology or physiology	6.23E-03
116	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	6.23E-03
117	GO:2001141: regulation of RNA biosynthetic process	6.23E-03
118	GO:0042989: sequestering of actin monomers	6.23E-03
119	GO:0031048: chromatin silencing by small RNA	6.23E-03
120	GO:1990019: protein storage vacuole organization	6.23E-03
121	GO:0009067: aspartate family amino acid biosynthetic process	6.23E-03
122	GO:0010371: regulation of gibberellin biosynthetic process	6.23E-03
123	GO:0051513: regulation of monopolar cell growth	6.23E-03
124	GO:0007231: osmosensory signaling pathway	6.23E-03
125	GO:0009800: cinnamic acid biosynthetic process	6.23E-03
126	GO:0030071: regulation of mitotic metaphase/anaphase transition	6.23E-03
127	GO:0009725: response to hormone	7.01E-03
128	GO:0006094: gluconeogenesis	7.01E-03
129	GO:0009933: meristem structural organization	7.93E-03
130	GO:0010540: basipetal auxin transport	7.93E-03
131	GO:0006661: phosphatidylinositol biosynthetic process	8.46E-03
132	GO:0009765: photosynthesis, light harvesting	8.46E-03
133	GO:2000306: positive regulation of photomorphogenesis	8.46E-03
134	GO:0006021: inositol biosynthetic process	8.46E-03
135	GO:1902347: response to strigolactone	8.46E-03
136	GO:0045723: positive regulation of fatty acid biosynthetic process	8.46E-03
137	GO:0009956: radial pattern formation	8.46E-03
138	GO:0051567: histone H3-K9 methylation	8.46E-03
139	GO:0009755: hormone-mediated signaling pathway	8.46E-03
140	GO:0010508: positive regulation of autophagy	8.46E-03
141	GO:0008295: spermidine biosynthetic process	8.46E-03
142	GO:0044206: UMP salvage	8.46E-03
143	GO:0051781: positive regulation of cell division	8.46E-03
144	GO:0033500: carbohydrate homeostasis	8.46E-03
145	GO:2000038: regulation of stomatal complex development	8.46E-03
146	GO:0070588: calcium ion transmembrane transport	8.92E-03
147	GO:0030041: actin filament polymerization	1.09E-02
148	GO:0010438: cellular response to sulfur starvation	1.09E-02
149	GO:0032876: negative regulation of DNA endoreduplication	1.09E-02
150	GO:0010117: photoprotection	1.09E-02
151	GO:0010375: stomatal complex patterning	1.09E-02
152	GO:0046283: anthocyanin-containing compound metabolic process	1.09E-02
153	GO:0010236: plastoquinone biosynthetic process	1.09E-02
154	GO:0045038: protein import into chloroplast thylakoid membrane	1.09E-02
155	GO:0048497: maintenance of floral organ identity	1.09E-02
156	GO:0009696: salicylic acid metabolic process	1.09E-02
157	GO:0016120: carotene biosynthetic process	1.09E-02
158	GO:0009107: lipoate biosynthetic process	1.09E-02
159	GO:0080110: sporopollenin biosynthetic process	1.09E-02
160	GO:0007010: cytoskeleton organization	1.11E-02
161	GO:0009944: polarity specification of adaxial/abaxial axis	1.11E-02
162	GO:0016311: dephosphorylation	1.12E-02
163	GO:0048316: seed development	1.16E-02
164	GO:0006418: tRNA aminoacylation for protein translation	1.23E-02
165	GO:0071555: cell wall organization	1.30E-02
166	GO:0010431: seed maturation	1.35E-02
167	GO:0003006: developmental process involved in reproduction	1.36E-02
168	GO:0016458: gene silencing	1.36E-02
169	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.36E-02
170	GO:1901371: regulation of leaf morphogenesis	1.36E-02
171	GO:0006559: L-phenylalanine catabolic process	1.36E-02
172	GO:0006206: pyrimidine nucleobase metabolic process	1.36E-02
173	GO:0048827: phyllome development	1.36E-02
174	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.36E-02
175	GO:0009913: epidermal cell differentiation	1.36E-02
176	GO:0060918: auxin transport	1.36E-02
177	GO:1902456: regulation of stomatal opening	1.36E-02
178	GO:0009959: negative gravitropism	1.36E-02
179	GO:0048831: regulation of shoot system development	1.36E-02
180	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.62E-02
181	GO:0009942: longitudinal axis specification	1.65E-02
182	GO:0048509: regulation of meristem development	1.65E-02
183	GO:0030488: tRNA methylation	1.65E-02
184	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.65E-02
185	GO:0009088: threonine biosynthetic process	1.65E-02
186	GO:0010019: chloroplast-nucleus signaling pathway	1.65E-02
187	GO:1901259: chloroplast rRNA processing	1.65E-02
188	GO:0031930: mitochondria-nucleus signaling pathway	1.65E-02
189	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.65E-02
190	GO:0009648: photoperiodism	1.65E-02
191	GO:0010310: regulation of hydrogen peroxide metabolic process	1.65E-02
192	GO:0042372: phylloquinone biosynthetic process	1.65E-02
193	GO:0010444: guard mother cell differentiation	1.96E-02
194	GO:1900056: negative regulation of leaf senescence	1.96E-02
195	GO:0006400: tRNA modification	1.96E-02
196	GO:0010050: vegetative phase change	1.96E-02
197	GO:0015693: magnesium ion transport	1.96E-02
198	GO:0000082: G1/S transition of mitotic cell cycle	1.96E-02
199	GO:0009610: response to symbiotic fungus	1.96E-02
200	GO:0006955: immune response	1.96E-02
201	GO:0010098: suspensor development	1.96E-02
202	GO:0048528: post-embryonic root development	1.96E-02
203	GO:0008033: tRNA processing	2.08E-02
204	GO:0010118: stomatal movement	2.08E-02
205	GO:0009744: response to sucrose	2.23E-02
206	GO:0010154: fruit development	2.24E-02
207	GO:0010182: sugar mediated signaling pathway	2.24E-02
208	GO:0048868: pollen tube development	2.24E-02
209	GO:0009850: auxin metabolic process	2.29E-02
210	GO:0032875: regulation of DNA endoreduplication	2.29E-02
211	GO:0009819: drought recovery	2.29E-02
212	GO:0045010: actin nucleation	2.29E-02
213	GO:0042255: ribosome assembly	2.29E-02
214	GO:0070413: trehalose metabolism in response to stress	2.29E-02
215	GO:0006402: mRNA catabolic process	2.29E-02
216	GO:0010439: regulation of glucosinolate biosynthetic process	2.29E-02
217	GO:0009845: seed germination	2.32E-02
218	GO:0007018: microtubule-based movement	2.41E-02
219	GO:0042752: regulation of circadian rhythm	2.41E-02
220	GO:0009965: leaf morphogenesis	2.59E-02
221	GO:0048825: cotyledon development	2.59E-02
222	GO:0006002: fructose 6-phosphate metabolic process	2.64E-02
223	GO:0015996: chlorophyll catabolic process	2.64E-02
224	GO:0009827: plant-type cell wall modification	2.64E-02
225	GO:0032544: plastid translation	2.64E-02
226	GO:0007389: pattern specification process	2.64E-02
227	GO:0010497: plasmodesmata-mediated intercellular transport	2.64E-02
228	GO:0010093: specification of floral organ identity	2.64E-02
229	GO:0000302: response to reactive oxygen species	2.77E-02
230	GO:0032502: developmental process	2.96E-02
231	GO:0046916: cellular transition metal ion homeostasis	3.01E-02
232	GO:0006098: pentose-phosphate shunt	3.01E-02
233	GO:0009056: catabolic process	3.01E-02
234	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.01E-02
235	GO:0006464: cellular protein modification process	3.36E-02
236	GO:0009828: plant-type cell wall loosening	3.36E-02
237	GO:0009638: phototropism	3.39E-02
238	GO:0006779: porphyrin-containing compound biosynthetic process	3.39E-02
239	GO:0009098: leucine biosynthetic process	3.39E-02
240	GO:0010018: far-red light signaling pathway	3.39E-02
241	GO:0009086: methionine biosynthetic process	3.39E-02
242	GO:0016573: histone acetylation	3.39E-02
243	GO:1900426: positive regulation of defense response to bacterium	3.39E-02
244	GO:0042761: very long-chain fatty acid biosynthetic process	3.39E-02
245	GO:0016571: histone methylation	3.39E-02
246	GO:0007267: cell-cell signaling	3.57E-02
247	GO:0007275: multicellular organism development	3.72E-02
248	GO:0006535: cysteine biosynthetic process from serine	3.78E-02
249	GO:0030422: production of siRNA involved in RNA interference	3.78E-02
250	GO:0006782: protoporphyrinogen IX biosynthetic process	3.78E-02
251	GO:0019538: protein metabolic process	3.78E-02
252	GO:0009641: shade avoidance	3.78E-02
253	GO:0006298: mismatch repair	3.78E-02
254	GO:0016441: posttranscriptional gene silencing	3.78E-02
255	GO:0006949: syncytium formation	3.78E-02
256	GO:0006259: DNA metabolic process	3.78E-02
257	GO:0009299: mRNA transcription	3.78E-02
258	GO:0010192: mucilage biosynthetic process	3.78E-02
259	GO:0031627: telomeric loop formation	3.78E-02
260	GO:0051607: defense response to virus	3.79E-02
261	GO:0010027: thylakoid membrane organization	4.01E-02
262	GO:0009911: positive regulation of flower development	4.01E-02
263	GO:0007166: cell surface receptor signaling pathway	4.04E-02
264	GO:0006468: protein phosphorylation	4.12E-02
265	GO:0006816: calcium ion transport	4.19E-02
266	GO:0006352: DNA-templated transcription, initiation	4.19E-02
267	GO:0009750: response to fructose	4.19E-02
268	GO:0009682: induced systemic resistance	4.19E-02
269	GO:0048765: root hair cell differentiation	4.19E-02
270	GO:0006415: translational termination	4.19E-02
271	GO:0006265: DNA topological change	4.19E-02
272	GO:0009089: lysine biosynthetic process via diaminopimelate	4.19E-02
273	GO:0010029: regulation of seed germination	4.24E-02
274	GO:0006790: sulfur compound metabolic process	4.62E-02
275	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.62E-02
276	GO:0010411: xyloglucan metabolic process	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
2	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
3	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0004401: histidinol-phosphatase activity	0.00E+00
8	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
9	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
10	GO:0046905: phytoene synthase activity	0.00E+00
11	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
12	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
13	GO:0071633: dihydroceramidase activity	0.00E+00
14	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
15	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
16	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
17	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
18	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
19	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
20	GO:0003723: RNA binding	6.95E-07
21	GO:0008805: carbon-monoxide oxygenase activity	5.34E-05
22	GO:0017118: lipoyltransferase activity	5.34E-05
23	GO:0004519: endonuclease activity	1.46E-04
24	GO:0001872: (1->3)-beta-D-glucan binding	3.20E-04
25	GO:0004805: trehalose-phosphatase activity	5.29E-04
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.06E-03
27	GO:0008158: hedgehog receptor activity	1.16E-03
28	GO:0042834: peptidoglycan binding	1.16E-03
29	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	1.16E-03
30	GO:0004832: valine-tRNA ligase activity	1.16E-03
31	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.16E-03
32	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	1.16E-03
33	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.16E-03
34	GO:0004830: tryptophan-tRNA ligase activity	1.16E-03
35	GO:0004813: alanine-tRNA ligase activity	1.16E-03
36	GO:0005290: L-histidine transmembrane transporter activity	1.16E-03
37	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	1.16E-03
38	GO:0003879: ATP phosphoribosyltransferase activity	1.16E-03
39	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.16E-03
40	GO:0052381: tRNA dimethylallyltransferase activity	1.16E-03
41	GO:0051996: squalene synthase activity	1.16E-03
42	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.16E-03
43	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.16E-03
44	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.16E-03
45	GO:0005227: calcium activated cation channel activity	1.16E-03
46	GO:0004871: signal transducer activity	2.17E-03
47	GO:0052832: inositol monophosphate 3-phosphatase activity	2.56E-03
48	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	2.56E-03
49	GO:0008934: inositol monophosphate 1-phosphatase activity	2.56E-03
50	GO:0050017: L-3-cyanoalanine synthase activity	2.56E-03
51	GO:0008493: tetracycline transporter activity	2.56E-03
52	GO:0052833: inositol monophosphate 4-phosphatase activity	2.56E-03
53	GO:0000064: L-ornithine transmembrane transporter activity	2.56E-03
54	GO:0004826: phenylalanine-tRNA ligase activity	2.56E-03
55	GO:0004412: homoserine dehydrogenase activity	2.56E-03
56	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	2.56E-03
57	GO:0050736: O-malonyltransferase activity	2.56E-03
58	GO:0003852: 2-isopropylmalate synthase activity	2.56E-03
59	GO:0009884: cytokinin receptor activity	2.56E-03
60	GO:0043425: bHLH transcription factor binding	2.56E-03
61	GO:0010296: prenylcysteine methylesterase activity	2.56E-03
62	GO:0016415: octanoyltransferase activity	2.56E-03
63	GO:0004047: aminomethyltransferase activity	2.56E-03
64	GO:0004766: spermidine synthase activity	2.56E-03
65	GO:0004829: threonine-tRNA ligase activity	2.56E-03
66	GO:0030570: pectate lyase activity	2.63E-03
67	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.12E-03
68	GO:0045548: phenylalanine ammonia-lyase activity	4.26E-03
69	GO:0003913: DNA photolyase activity	4.26E-03
70	GO:0016805: dipeptidase activity	4.26E-03
71	GO:0004148: dihydrolipoyl dehydrogenase activity	4.26E-03
72	GO:0005034: osmosensor activity	4.26E-03
73	GO:0004557: alpha-galactosidase activity	4.26E-03
74	GO:0052692: raffinose alpha-galactosidase activity	4.26E-03
75	GO:0080054: low-affinity nitrate transmembrane transporter activity	4.26E-03
76	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	4.26E-03
77	GO:0004180: carboxypeptidase activity	4.26E-03
78	GO:0019901: protein kinase binding	4.79E-03
79	GO:0004518: nuclease activity	5.70E-03
80	GO:0043621: protein self-association	6.09E-03
81	GO:0000049: tRNA binding	6.15E-03
82	GO:0016149: translation release factor activity, codon specific	6.23E-03
83	GO:0004072: aspartate kinase activity	6.23E-03
84	GO:0009882: blue light photoreceptor activity	6.23E-03
85	GO:0015181: arginine transmembrane transporter activity	6.23E-03
86	GO:0080031: methyl salicylate esterase activity	6.23E-03
87	GO:0035197: siRNA binding	6.23E-03
88	GO:0004300: enoyl-CoA hydratase activity	6.23E-03
89	GO:0015189: L-lysine transmembrane transporter activity	6.23E-03
90	GO:0005262: calcium channel activity	7.01E-03
91	GO:0003725: double-stranded RNA binding	7.01E-03
92	GO:0004672: protein kinase activity	8.05E-03
93	GO:0016987: sigma factor activity	8.46E-03
94	GO:0042277: peptide binding	8.46E-03
95	GO:0010328: auxin influx transmembrane transporter activity	8.46E-03
96	GO:0019199: transmembrane receptor protein kinase activity	8.46E-03
97	GO:0001053: plastid sigma factor activity	8.46E-03
98	GO:0004845: uracil phosphoribosyltransferase activity	8.46E-03
99	GO:0010011: auxin binding	8.46E-03
100	GO:0070628: proteasome binding	8.46E-03
101	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	8.46E-03
102	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.26E-03
103	GO:0005471: ATP:ADP antiporter activity	1.09E-02
104	GO:0003785: actin monomer binding	1.09E-02
105	GO:0008725: DNA-3-methyladenine glycosylase activity	1.09E-02
106	GO:0031418: L-ascorbic acid binding	1.11E-02
107	GO:0043424: protein histidine kinase binding	1.23E-02
108	GO:0005096: GTPase activator activity	1.27E-02
109	GO:0004332: fructose-bisphosphate aldolase activity	1.36E-02
110	GO:0004709: MAP kinase kinase kinase activity	1.36E-02
111	GO:0004462: lactoylglutathione lyase activity	1.36E-02
112	GO:0016688: L-ascorbate peroxidase activity	1.36E-02
113	GO:0004130: cytochrome-c peroxidase activity	1.36E-02
114	GO:2001070: starch binding	1.36E-02
115	GO:0031593: polyubiquitin binding	1.36E-02
116	GO:0030983: mismatched DNA binding	1.36E-02
117	GO:0080030: methyl indole-3-acetate esterase activity	1.36E-02
118	GO:0003779: actin binding	1.40E-02
119	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.65E-02
120	GO:0004656: procollagen-proline 4-dioxygenase activity	1.65E-02
121	GO:0016832: aldehyde-lyase activity	1.65E-02
122	GO:0019900: kinase binding	1.65E-02
123	GO:0004124: cysteine synthase activity	1.65E-02
124	GO:0051753: mannan synthase activity	1.65E-02
125	GO:0004849: uridine kinase activity	1.65E-02
126	GO:0003727: single-stranded RNA binding	1.77E-02
127	GO:0016301: kinase activity	1.82E-02
128	GO:0004812: aminoacyl-tRNA ligase activity	1.92E-02
129	GO:0009881: photoreceptor activity	1.96E-02
130	GO:0019843: rRNA binding	2.06E-02
131	GO:0043022: ribosome binding	2.29E-02
132	GO:0016829: lyase activity	2.32E-02
133	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.64E-02
134	GO:0046914: transition metal ion binding	2.64E-02
135	GO:0003724: RNA helicase activity	2.64E-02
136	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.77E-02
137	GO:0071949: FAD binding	3.01E-02
138	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.01E-02
139	GO:0003747: translation release factor activity	3.01E-02
140	GO:0003684: damaged DNA binding	3.36E-02
141	GO:0016791: phosphatase activity	3.36E-02
142	GO:0003690: double-stranded DNA binding	3.39E-02
143	GO:0009672: auxin:proton symporter activity	3.39E-02
144	GO:0005200: structural constituent of cytoskeleton	3.57E-02
145	GO:0003777: microtubule motor activity	3.69E-02
146	GO:0004673: protein histidine kinase activity	3.78E-02
147	GO:0016413: O-acetyltransferase activity	3.79E-02
148	GO:0016597: amino acid binding	3.79E-02
149	GO:0003691: double-stranded telomeric DNA binding	4.19E-02
150	GO:0004161: dimethylallyltranstransferase activity	4.19E-02
151	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.19E-02
152	GO:0005524: ATP binding	4.26E-02
153	GO:0004674: protein serine/threonine kinase activity	4.58E-02
154	GO:0000976: transcription regulatory region sequence-specific DNA binding	4.62E-02
155	GO:0004521: endoribonuclease activity	4.62E-02
156	GO:0042803: protein homodimerization activity	4.65E-02
157	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.72E-02
158	GO:0030247: polysaccharide binding	4.72E-02
159	GO:0004721: phosphoprotein phosphatase activity	4.72E-02
160	GO:0005515: protein binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0035452: extrinsic component of plastid membrane	0.00E+00
4	GO:0009507: chloroplast	6.29E-16
5	GO:0009570: chloroplast stroma	3.44E-06
6	GO:0005886: plasma membrane	4.11E-05
7	GO:0030529: intracellular ribonucleoprotein complex	3.09E-04
8	GO:0046658: anchored component of plasma membrane	1.68E-03
9	GO:0009986: cell surface	1.79E-03
10	GO:0009941: chloroplast envelope	1.85E-03
11	GO:0009532: plastid stroma	2.09E-03
12	GO:0009513: etioplast	2.56E-03
13	GO:0015629: actin cytoskeleton	2.63E-03
14	GO:0031225: anchored component of membrane	2.70E-03
15	GO:0031969: chloroplast membrane	3.84E-03
16	GO:0016604: nuclear body	3.93E-03
17	GO:0009528: plastid inner membrane	4.26E-03
18	GO:0009509: chromoplast	4.26E-03
19	GO:0016605: PML body	4.26E-03
20	GO:0030139: endocytic vesicle	4.26E-03
21	GO:0005719: nuclear euchromatin	6.23E-03
22	GO:0032585: multivesicular body membrane	6.23E-03
23	GO:0009508: plastid chromosome	7.01E-03
24	GO:0009295: nucleoid	7.26E-03
25	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	8.46E-03
26	GO:0030663: COPI-coated vesicle membrane	8.46E-03
27	GO:0009527: plastid outer membrane	8.46E-03
28	GO:0009707: chloroplast outer membrane	1.19E-02
29	GO:0031209: SCAR complex	1.36E-02
30	GO:0005655: nucleolar ribonuclease P complex	1.65E-02
31	GO:0005871: kinesin complex	1.92E-02
32	GO:0042807: central vacuole	1.96E-02
33	GO:0031305: integral component of mitochondrial inner membrane	2.29E-02
34	GO:0009501: amyloplast	2.29E-02
35	GO:0000783: nuclear telomere cap complex	2.64E-02
36	GO:0000326: protein storage vacuole	2.64E-02
37	GO:0005759: mitochondrial matrix	2.89E-02
38	GO:0005680: anaphase-promoting complex	3.01E-02
39	GO:0010494: cytoplasmic stress granule	3.01E-02
40	GO:0015030: Cajal body	3.39E-02
41	GO:0000418: DNA-directed RNA polymerase IV complex	3.78E-02
42	GO:0016459: myosin complex	3.78E-02
43	GO:0030125: clathrin vesicle coat	3.78E-02
44	GO:0000311: plastid large ribosomal subunit	4.62E-02