Gene: AT5G42300
     

Gene description


TAIR ID: AT5G42300

Short description: ubiquitin-like protein 5

Pathogen responsiveness: -1.90

General responsiveness: -2.14

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G132000  

Wheat: No orthologous gene

GO biological process


mRNA splicing, via spliceosome, cellular protein modification process


GO cellular component


cytoplasm, nucleus


GO molecular function


protein tag


Protein domain


PfamPF00240, Ubiquitin family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.748.84E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.262.38E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.535.60E-11






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