Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42300

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
2GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
3GO:0001881: receptor recycling0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0032780: negative regulation of ATPase activity0.00E+00
6GO:0006482: protein demethylation0.00E+00
7GO:0010360: negative regulation of anion channel activity0.00E+00
8GO:0051603: proteolysis involved in cellular protein catabolic process2.53E-05
9GO:0010188: response to microbial phytotoxin4.46E-05
10GO:0009962: regulation of flavonoid biosynthetic process2.55E-04
11GO:1902361: mitochondrial pyruvate transmembrane transport2.55E-04
12GO:0010265: SCF complex assembly2.55E-04
13GO:0034214: protein hexamerization2.55E-04
14GO:0048455: stamen formation2.55E-04
15GO:0046167: glycerol-3-phosphate biosynthetic process2.55E-04
16GO:0006805: xenobiotic metabolic process2.55E-04
17GO:0000303: response to superoxide2.55E-04
18GO:0080173: male-female gamete recognition during double fertilization2.55E-04
19GO:0006481: C-terminal protein methylation2.55E-04
20GO:0006914: autophagy3.69E-04
21GO:0008202: steroid metabolic process4.21E-04
22GO:0015031: protein transport4.81E-04
23GO:0051788: response to misfolded protein5.64E-04
24GO:1902000: homogentisate catabolic process5.64E-04
25GO:0019441: tryptophan catabolic process to kynurenine5.64E-04
26GO:0097054: L-glutamate biosynthetic process5.64E-04
27GO:0031648: protein destabilization5.64E-04
28GO:0071395: cellular response to jasmonic acid stimulus5.64E-04
29GO:1905182: positive regulation of urease activity5.64E-04
30GO:0006641: triglyceride metabolic process5.64E-04
31GO:0019521: D-gluconate metabolic process5.64E-04
32GO:0006212: uracil catabolic process5.64E-04
33GO:0019374: galactolipid metabolic process5.64E-04
34GO:0019483: beta-alanine biosynthetic process5.64E-04
35GO:0006850: mitochondrial pyruvate transport5.64E-04
36GO:0015865: purine nucleotide transport5.64E-04
37GO:0012501: programmed cell death6.51E-04
38GO:0002237: response to molecule of bacterial origin8.30E-04
39GO:0034051: negative regulation of plant-type hypersensitive response9.15E-04
40GO:0010498: proteasomal protein catabolic process9.15E-04
41GO:0010359: regulation of anion channel activity9.15E-04
42GO:0008333: endosome to lysosome transport9.15E-04
43GO:0043617: cellular response to sucrose starvation9.15E-04
44GO:0071492: cellular response to UV-A9.15E-04
45GO:0009072: aromatic amino acid family metabolic process9.15E-04
46GO:0019563: glycerol catabolic process9.15E-04
47GO:0034976: response to endoplasmic reticulum stress1.03E-03
48GO:0006631: fatty acid metabolic process1.09E-03
49GO:0006809: nitric oxide biosynthetic process1.31E-03
50GO:0010255: glucose mediated signaling pathway1.31E-03
51GO:0001676: long-chain fatty acid metabolic process1.31E-03
52GO:0045017: glycerolipid biosynthetic process1.31E-03
53GO:0006624: vacuolar protein processing1.31E-03
54GO:0006537: glutamate biosynthetic process1.31E-03
55GO:0046902: regulation of mitochondrial membrane permeability1.31E-03
56GO:0006072: glycerol-3-phosphate metabolic process1.31E-03
57GO:0006511: ubiquitin-dependent protein catabolic process1.47E-03
58GO:0032366: intracellular sterol transport1.75E-03
59GO:0006878: cellular copper ion homeostasis1.75E-03
60GO:0006542: glutamine biosynthetic process1.75E-03
61GO:0070534: protein K63-linked ubiquitination1.75E-03
62GO:0019676: ammonia assimilation cycle1.75E-03
63GO:0071486: cellular response to high light intensity1.75E-03
64GO:0009765: photosynthesis, light harvesting1.75E-03
65GO:0010363: regulation of plant-type hypersensitive response1.75E-03
66GO:0042147: retrograde transport, endosome to Golgi1.92E-03
67GO:0098719: sodium ion import across plasma membrane2.23E-03
68GO:0030308: negative regulation of cell growth2.23E-03
69GO:0006090: pyruvate metabolic process2.23E-03
70GO:0006623: protein targeting to vacuole2.57E-03
71GO:0035435: phosphate ion transmembrane transport2.75E-03
72GO:0002238: response to molecule of fungal origin2.75E-03
73GO:0010193: response to ozone2.75E-03
74GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.75E-03
75GO:0006301: postreplication repair2.75E-03
76GO:0006751: glutathione catabolic process2.75E-03
77GO:0043248: proteasome assembly2.75E-03
78GO:0070814: hydrogen sulfide biosynthetic process2.75E-03
79GO:0010358: leaf shaping2.75E-03
80GO:1902456: regulation of stomatal opening2.75E-03
81GO:0009611: response to wounding3.26E-03
82GO:0048280: vesicle fusion with Golgi apparatus3.30E-03
83GO:0010189: vitamin E biosynthetic process3.30E-03
84GO:0045454: cell redox homeostasis3.61E-03
85GO:0010038: response to metal ion3.89E-03
86GO:0050790: regulation of catalytic activity3.89E-03
87GO:0010044: response to aluminum ion3.89E-03
88GO:0006401: RNA catabolic process3.89E-03
89GO:0006955: immune response3.89E-03
90GO:0046470: phosphatidylcholine metabolic process3.89E-03
91GO:0048528: post-embryonic root development3.89E-03
92GO:0071446: cellular response to salicylic acid stimulus3.89E-03
93GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.89E-03
94GO:0043068: positive regulation of programmed cell death4.52E-03
95GO:0006605: protein targeting4.52E-03
96GO:2000070: regulation of response to water deprivation4.52E-03
97GO:0006102: isocitrate metabolic process4.52E-03
98GO:0006644: phospholipid metabolic process4.52E-03
99GO:0006888: ER to Golgi vesicle-mediated transport4.68E-03
100GO:0043562: cellular response to nitrogen levels5.18E-03
101GO:0007338: single fertilization5.86E-03
102GO:0046685: response to arsenic-containing substance5.86E-03
103GO:0051865: protein autoubiquitination5.86E-03
104GO:0090305: nucleic acid phosphodiester bond hydrolysis5.86E-03
105GO:0006098: pentose-phosphate shunt5.86E-03
106GO:0010119: regulation of stomatal movement5.99E-03
107GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.33E-03
108GO:0009867: jasmonic acid mediated signaling pathway6.56E-03
109GO:0051453: regulation of intracellular pH6.58E-03
110GO:0009617: response to bacterium6.88E-03
111GO:0000103: sulfate assimilation7.33E-03
112GO:0019538: protein metabolic process7.33E-03
113GO:0009873: ethylene-activated signaling pathway7.33E-03
114GO:0043069: negative regulation of programmed cell death7.33E-03
115GO:0006896: Golgi to vacuole transport7.33E-03
116GO:0046686: response to cadmium ion7.76E-03
117GO:0043085: positive regulation of catalytic activity8.11E-03
118GO:0009744: response to sucrose8.47E-03
119GO:0010102: lateral root morphogenesis9.75E-03
120GO:0006807: nitrogen compound metabolic process9.75E-03
121GO:0055046: microgametogenesis9.75E-03
122GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.03E-02
123GO:0007034: vacuolar transport1.06E-02
124GO:0006979: response to oxidative stress1.09E-02
125GO:0009723: response to ethylene1.15E-02
126GO:0010053: root epidermal cell differentiation1.15E-02
127GO:0006071: glycerol metabolic process1.24E-02
128GO:0009651: response to salt stress1.31E-02
129GO:0030150: protein import into mitochondrial matrix1.34E-02
130GO:2000377: regulation of reactive oxygen species metabolic process1.34E-02
131GO:0006468: protein phosphorylation1.46E-02
132GO:0045892: negative regulation of transcription, DNA-templated1.62E-02
133GO:0030433: ubiquitin-dependent ERAD pathway1.64E-02
134GO:0031348: negative regulation of defense response1.64E-02
135GO:0009561: megagametogenesis1.85E-02
136GO:0010091: trichome branching1.85E-02
137GO:0016310: phosphorylation1.86E-02
138GO:0032259: methylation1.95E-02
139GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.95E-02
140GO:0016042: lipid catabolic process1.99E-02
141GO:0006629: lipid metabolic process2.06E-02
142GO:0042391: regulation of membrane potential2.07E-02
143GO:0010087: phloem or xylem histogenesis2.07E-02
144GO:0010118: stomatal movement2.07E-02
145GO:0042631: cellular response to water deprivation2.07E-02
146GO:0071472: cellular response to salt stress2.18E-02
147GO:0006662: glycerol ether metabolic process2.18E-02
148GO:0006814: sodium ion transport2.29E-02
149GO:0042752: regulation of circadian rhythm2.29E-02
150GO:0009646: response to absence of light2.29E-02
151GO:0006891: intra-Golgi vesicle-mediated transport2.53E-02
152GO:0006635: fatty acid beta-oxidation2.53E-02
153GO:0009630: gravitropism2.65E-02
154GO:0007264: small GTPase mediated signal transduction2.65E-02
155GO:0010583: response to cyclopentenone2.65E-02
156GO:0016032: viral process2.65E-02
157GO:0030163: protein catabolic process2.78E-02
158GO:0010150: leaf senescence2.83E-02
159GO:0006464: cellular protein modification process2.90E-02
160GO:0009567: double fertilization forming a zygote and endosperm2.90E-02
161GO:0071805: potassium ion transmembrane transport3.03E-02
162GO:0051607: defense response to virus3.16E-02
163GO:0055114: oxidation-reduction process3.18E-02
164GO:0006470: protein dephosphorylation3.23E-02
165GO:0010029: regulation of seed germination3.42E-02
166GO:0009816: defense response to bacterium, incompatible interaction3.42E-02
167GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.42E-02
168GO:0042128: nitrate assimilation3.56E-02
169GO:0006974: cellular response to DNA damage stimulus3.56E-02
170GO:0006950: response to stress3.70E-02
171GO:0009737: response to abscisic acid3.87E-02
172GO:0009733: response to auxin4.00E-02
173GO:0009738: abscisic acid-activated signaling pathway4.04E-02
174GO:0048767: root hair elongation4.12E-02
175GO:0009407: toxin catabolic process4.26E-02
176GO:0010043: response to zinc ion4.41E-02
177GO:0007568: aging4.41E-02
178GO:0009910: negative regulation of flower development4.41E-02
179GO:0006970: response to osmotic stress4.69E-02
180GO:0034599: cellular response to oxidative stress4.85E-02
181GO:0006099: tricarboxylic acid cycle4.85E-02
182GO:0007049: cell cycle4.86E-02
RankGO TermAdjusted P value
1GO:0016508: long-chain-enoyl-CoA hydratase activity0.00E+00
2GO:0004370: glycerol kinase activity0.00E+00
3GO:0051723: protein methylesterase activity0.00E+00
4GO:0004157: dihydropyrimidinase activity0.00E+00
5GO:0019786: Atg8-specific protease activity0.00E+00
6GO:0042030: ATPase inhibitor activity0.00E+00
7GO:0016034: maleylacetoacetate isomerase activity0.00E+00
8GO:0050342: tocopherol O-methyltransferase activity0.00E+00
9GO:0050242: pyruvate, phosphate dikinase activity0.00E+00
10GO:0015930: glutamate synthase activity0.00E+00
11GO:0019779: Atg8 activating enzyme activity3.02E-06
12GO:0004713: protein tyrosine kinase activity1.90E-05
13GO:0008794: arsenate reductase (glutaredoxin) activity2.44E-05
14GO:0019776: Atg8 ligase activity4.46E-05
15GO:0031593: polyubiquitin binding1.04E-04
16GO:0102391: decanoate--CoA ligase activity1.43E-04
17GO:0004620: phospholipase activity1.88E-04
18GO:0004467: long-chain fatty acid-CoA ligase activity1.88E-04
19GO:0005515: protein binding2.48E-04
20GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.55E-04
21GO:0030611: arsenate reductase activity2.55E-04
22GO:0016041: glutamate synthase (ferredoxin) activity2.55E-04
23GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity2.55E-04
24GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity2.55E-04
25GO:0008692: 3-hydroxybutyryl-CoA epimerase activity2.55E-04
26GO:0008142: oxysterol binding2.94E-04
27GO:0004197: cysteine-type endopeptidase activity3.12E-04
28GO:0019172: glyoxalase III activity5.64E-04
29GO:0004061: arylformamidase activity5.64E-04
30GO:0015036: disulfide oxidoreductase activity5.64E-04
31GO:0019200: carbohydrate kinase activity5.64E-04
32GO:0004450: isocitrate dehydrogenase (NADP+) activity5.64E-04
33GO:0008517: folic acid transporter activity5.64E-04
34GO:0004566: beta-glucuronidase activity5.64E-04
35GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity5.64E-04
36GO:0032934: sterol binding5.64E-04
37GO:0003840: gamma-glutamyltransferase activity9.15E-04
38GO:0036374: glutathione hydrolase activity9.15E-04
39GO:0050833: pyruvate transmembrane transporter activity9.15E-04
40GO:0004781: sulfate adenylyltransferase (ATP) activity9.15E-04
41GO:0016805: dipeptidase activity9.15E-04
42GO:0005093: Rab GDP-dissociation inhibitor activity9.15E-04
43GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity9.15E-04
44GO:0016151: nickel cation binding9.15E-04
45GO:0004165: dodecenoyl-CoA delta-isomerase activity1.31E-03
46GO:0004300: enoyl-CoA hydratase activity1.31E-03
47GO:0001653: peptide receptor activity1.31E-03
48GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.31E-03
49GO:0005524: ATP binding1.38E-03
50GO:0004301: epoxide hydrolase activity1.75E-03
51GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.23E-03
52GO:0005496: steroid binding2.23E-03
53GO:0051538: 3 iron, 4 sulfur cluster binding2.23E-03
54GO:0005471: ATP:ADP antiporter activity2.23E-03
55GO:0004356: glutamate-ammonia ligase activity2.23E-03
56GO:0016887: ATPase activity2.48E-03
57GO:0036402: proteasome-activating ATPase activity2.75E-03
58GO:0047714: galactolipase activity2.75E-03
59GO:0015035: protein disulfide oxidoreductase activity2.84E-03
60GO:0061630: ubiquitin protein ligase activity2.96E-03
61GO:0003950: NAD+ ADP-ribosyltransferase activity3.30E-03
62GO:0004144: diacylglycerol O-acyltransferase activity3.30E-03
63GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.30E-03
64GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.30E-03
65GO:0004871: signal transducer activity3.88E-03
66GO:0004143: diacylglycerol kinase activity3.89E-03
67GO:0008235: metalloexopeptidase activity3.89E-03
68GO:0004869: cysteine-type endopeptidase inhibitor activity4.52E-03
69GO:0016787: hydrolase activity5.01E-03
70GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.18E-03
71GO:0003951: NAD+ kinase activity5.18E-03
72GO:0004630: phospholipase D activity5.18E-03
73GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.18E-03
74GO:0005096: GTPase activator activity5.44E-03
75GO:0008889: glycerophosphodiester phosphodiesterase activity5.86E-03
76GO:0047617: acyl-CoA hydrolase activity6.58E-03
77GO:0045309: protein phosphorylated amino acid binding6.58E-03
78GO:0004712: protein serine/threonine/tyrosine kinase activity7.17E-03
79GO:0019904: protein domain specific binding8.11E-03
80GO:0015386: potassium:proton antiporter activity8.11E-03
81GO:0004177: aminopeptidase activity8.11E-03
82GO:0008559: xenobiotic-transporting ATPase activity8.11E-03
83GO:0004364: glutathione transferase activity8.13E-03
84GO:0005509: calcium ion binding9.36E-03
85GO:0015266: protein channel activity9.75E-03
86GO:0005315: inorganic phosphate transmembrane transporter activity9.75E-03
87GO:0004175: endopeptidase activity1.06E-02
88GO:0030552: cAMP binding1.15E-02
89GO:0030553: cGMP binding1.15E-02
90GO:0017025: TBP-class protein binding1.15E-02
91GO:0004725: protein tyrosine phosphatase activity1.24E-02
92GO:0031625: ubiquitin protein ligase binding1.27E-02
93GO:0008234: cysteine-type peptidase activity1.27E-02
94GO:0043424: protein histidine kinase binding1.43E-02
95GO:0005216: ion channel activity1.43E-02
96GO:0004298: threonine-type endopeptidase activity1.53E-02
97GO:0004722: protein serine/threonine phosphatase activity1.78E-02
98GO:0003756: protein disulfide isomerase activity1.85E-02
99GO:0047134: protein-disulfide reductase activity1.95E-02
100GO:0005249: voltage-gated potassium channel activity2.07E-02
101GO:0030551: cyclic nucleotide binding2.07E-02
102GO:0004672: protein kinase activity2.08E-02
103GO:0005199: structural constituent of cell wall2.18E-02
104GO:0009055: electron carrier activity2.25E-02
105GO:0004791: thioredoxin-disulfide reductase activity2.29E-02
106GO:0016853: isomerase activity2.29E-02
107GO:0004872: receptor activity2.41E-02
108GO:0004518: nuclease activity2.65E-02
109GO:0015385: sodium:proton antiporter activity2.78E-02
110GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.78E-02
111GO:0004674: protein serine/threonine kinase activity2.90E-02
112GO:0008483: transaminase activity3.03E-02
113GO:0016168: chlorophyll binding3.42E-02
114GO:0009931: calcium-dependent protein serine/threonine kinase activity3.56E-02
115GO:0004806: triglyceride lipase activity3.70E-02
116GO:0004683: calmodulin-dependent protein kinase activity3.70E-02
117GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.97E-02
118GO:0008168: methyltransferase activity4.20E-02
119GO:0030145: manganese ion binding4.41E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005773: vacuole1.09E-06
3GO:0005829: cytosol1.51E-06
4GO:0005775: vacuolar lumen2.46E-05
5GO:0005776: autophagosome4.46E-05
6GO:0005886: plasma membrane9.14E-05
7GO:0031410: cytoplasmic vesicle1.20E-04
8GO:0000421: autophagosome membrane2.38E-04
9GO:0031305: integral component of mitochondrial inner membrane2.38E-04
10GO:0000502: proteasome complex2.52E-04
11GO:0031972: chloroplast intermembrane space2.55E-04
12GO:0005777: peroxisome2.62E-04
13GO:0005783: endoplasmic reticulum2.79E-04
14GO:0008540: proteasome regulatory particle, base subcomplex4.21E-04
15GO:0031314: extrinsic component of mitochondrial inner membrane5.64E-04
16GO:0005764: lysosome8.30E-04
17GO:0030139: endocytic vesicle9.15E-04
18GO:0009530: primary cell wall9.15E-04
19GO:0005618: cell wall9.94E-04
20GO:0031461: cullin-RING ubiquitin ligase complex1.31E-03
21GO:0000323: lytic vacuole1.31E-03
22GO:0032585: multivesicular body membrane1.31E-03
23GO:0031372: UBC13-MMS2 complex1.75E-03
24GO:0000164: protein phosphatase type 1 complex2.23E-03
25GO:0005771: multivesicular body2.75E-03
26GO:0030127: COPII vesicle coat2.75E-03
27GO:0030904: retromer complex2.75E-03
28GO:0030140: trans-Golgi network transport vesicle2.75E-03
29GO:0031597: cytosolic proteasome complex3.30E-03
30GO:0016363: nuclear matrix3.30E-03
31GO:0000794: condensed nuclear chromosome3.89E-03
32GO:0031595: nuclear proteasome complex3.89E-03
33GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.89E-03
34GO:0012507: ER to Golgi transport vesicle membrane4.52E-03
35GO:0009514: glyoxysome5.18E-03
36GO:0031901: early endosome membrane5.86E-03
37GO:0000325: plant-type vacuole5.99E-03
38GO:0005794: Golgi apparatus6.27E-03
39GO:0005819: spindle7.17E-03
40GO:0031902: late endosome membrane7.80E-03
41GO:0005765: lysosomal membrane8.11E-03
42GO:0016602: CCAAT-binding factor complex9.75E-03
43GO:0009506: plasmodesma1.18E-02
44GO:0005635: nuclear envelope1.23E-02
45GO:0005769: early endosome1.24E-02
46GO:0005774: vacuolar membrane1.40E-02
47GO:0010008: endosome membrane1.40E-02
48GO:0005839: proteasome core complex1.53E-02
49GO:0005744: mitochondrial inner membrane presequence translocase complex1.85E-02
50GO:0030136: clathrin-coated vesicle1.95E-02
51GO:0005623: cell2.10E-02
52GO:0009524: phragmoplast2.16E-02
53GO:0005770: late endosome2.18E-02
54GO:0009570: chloroplast stroma2.28E-02
55GO:0009523: photosystem II2.41E-02
56GO:0071944: cell periphery2.78E-02
57GO:0032580: Golgi cisterna membrane2.90E-02
58GO:0005737: cytoplasm3.05E-02
59GO:0005615: extracellular space3.16E-02
60GO:0005788: endoplasmic reticulum lumen3.42E-02
61GO:0000151: ubiquitin ligase complex3.97E-02
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Gene type



Gene DE type