co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002376: immune system process	0.00E+00
2	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
3	GO:0010360: negative regulation of anion channel activity	0.00E+00
4	GO:0030149: sphingolipid catabolic process	0.00E+00
5	GO:0006983: ER overload response	0.00E+00
6	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
7	GO:0045185: maintenance of protein location	0.00E+00
8	GO:0001881: receptor recycling	0.00E+00
9	GO:0006592: ornithine biosynthetic process	0.00E+00
10	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
11	GO:0031990: mRNA export from nucleus in response to heat stress	0.00E+00
12	GO:0006593: ornithine catabolic process	0.00E+00
13	GO:0001676: long-chain fatty acid metabolic process	2.59E-05
14	GO:0019375: galactolipid biosynthetic process	2.48E-04
15	GO:0009617: response to bacterium	2.60E-04
16	GO:0006481: C-terminal protein methylation	2.63E-04
17	GO:0010036: response to boron-containing substance	2.63E-04
18	GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex	2.63E-04
19	GO:0080136: priming of cellular response to stress	2.63E-04
20	GO:1902361: mitochondrial pyruvate transmembrane transport	2.63E-04
21	GO:0034214: protein hexamerization	2.63E-04
22	GO:0019544: arginine catabolic process to glutamate	2.63E-04
23	GO:1903648: positive regulation of chlorophyll catabolic process	2.63E-04
24	GO:0048482: plant ovule morphogenesis	2.63E-04
25	GO:0009821: alkaloid biosynthetic process	3.70E-04
26	GO:0043069: negative regulation of programmed cell death	5.12E-04
27	GO:0080029: cellular response to boron-containing substance levels	5.78E-04
28	GO:0006672: ceramide metabolic process	5.78E-04
29	GO:0019374: galactolipid metabolic process	5.78E-04
30	GO:0002240: response to molecule of oomycetes origin	5.78E-04
31	GO:0043066: negative regulation of apoptotic process	5.78E-04
32	GO:0006850: mitochondrial pyruvate transport	5.78E-04
33	GO:0019752: carboxylic acid metabolic process	5.78E-04
34	GO:0080026: response to indolebutyric acid	5.78E-04
35	GO:0045948: positive regulation of translational initiation	5.78E-04
36	GO:1902000: homogentisate catabolic process	5.78E-04
37	GO:2000693: positive regulation of seed maturation	5.78E-04
38	GO:0019441: tryptophan catabolic process to kynurenine	5.78E-04
39	GO:0097054: L-glutamate biosynthetic process	5.78E-04
40	GO:0010200: response to chitin	6.62E-04
41	GO:0009738: abscisic acid-activated signaling pathway	8.21E-04
42	GO:0007034: vacuolar transport	8.62E-04
43	GO:0009072: aromatic amino acid family metabolic process	9.39E-04
44	GO:0048281: inflorescence morphogenesis	9.39E-04
45	GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	9.39E-04
46	GO:0008333: endosome to lysosome transport	9.39E-04
47	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.39E-04
48	GO:0051646: mitochondrion localization	9.39E-04
49	GO:0034051: negative regulation of plant-type hypersensitive response	9.39E-04
50	GO:0010359: regulation of anion channel activity	9.39E-04
51	GO:0046621: negative regulation of organ growth	9.39E-04
52	GO:0009410: response to xenobiotic stimulus	9.39E-04
53	GO:0010447: response to acidic pH	9.39E-04
54	GO:0006631: fatty acid metabolic process	1.14E-03
55	GO:0055114: oxidation-reduction process	1.18E-03
56	GO:0051707: response to other organism	1.26E-03
57	GO:0006537: glutamate biosynthetic process	1.34E-03
58	GO:0015700: arsenite transport	1.34E-03
59	GO:0048530: fruit morphogenesis	1.34E-03
60	GO:0080024: indolebutyric acid metabolic process	1.34E-03
61	GO:0070676: intralumenal vesicle formation	1.34E-03
62	GO:0046713: borate transport	1.34E-03
63	GO:0031408: oxylipin biosynthetic process	1.43E-03
64	GO:2000038: regulation of stomatal complex development	1.79E-03
65	GO:0019676: ammonia assimilation cycle	1.79E-03
66	GO:0009247: glycolipid biosynthetic process	2.29E-03
67	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.29E-03
68	GO:0009626: plant-type hypersensitive response	2.47E-03
69	GO:0006623: protein targeting to vacuole	2.68E-03
70	GO:0048317: seed morphogenesis	2.82E-03
71	GO:1902456: regulation of stomatal opening	2.82E-03
72	GO:0009117: nucleotide metabolic process	2.82E-03
73	GO:0002238: response to molecule of fungal origin	2.82E-03
74	GO:0050665: hydrogen peroxide biosynthetic process	2.82E-03
75	GO:0006561: proline biosynthetic process	2.82E-03
76	GO:0000302: response to reactive oxygen species	2.87E-03
77	GO:0016192: vesicle-mediated transport	3.15E-03
78	GO:0000911: cytokinesis by cell plate formation	3.40E-03
79	GO:0009612: response to mechanical stimulus	3.40E-03
80	GO:0010199: organ boundary specification between lateral organs and the meristem	3.40E-03
81	GO:0010555: response to mannitol	3.40E-03
82	GO:2000037: regulation of stomatal complex patterning	3.40E-03
83	GO:2000067: regulation of root morphogenesis	3.40E-03
84	GO:0045454: cell redox homeostasis	3.84E-03
85	GO:0070370: cellular heat acclimation	4.00E-03
86	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	4.00E-03
87	GO:1900057: positive regulation of leaf senescence	4.00E-03
88	GO:0050790: regulation of catalytic activity	4.00E-03
89	GO:0010044: response to aluminum ion	4.00E-03
90	GO:0043090: amino acid import	4.00E-03
91	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.37E-03
92	GO:0009819: drought recovery	4.65E-03
93	GO:0043068: positive regulation of programmed cell death	4.65E-03
94	GO:0006605: protein targeting	4.65E-03
95	GO:0032875: regulation of DNA endoreduplication	4.65E-03
96	GO:2000070: regulation of response to water deprivation	4.65E-03
97	GO:0022900: electron transport chain	5.32E-03
98	GO:0007186: G-protein coupled receptor signaling pathway	5.32E-03
99	GO:0009657: plastid organization	5.32E-03
100	GO:0006367: transcription initiation from RNA polymerase II promoter	5.32E-03
101	GO:0010120: camalexin biosynthetic process	5.32E-03
102	GO:0006526: arginine biosynthetic process	5.32E-03
103	GO:0030968: endoplasmic reticulum unfolded protein response	5.32E-03
104	GO:0010150: leaf senescence	5.78E-03
105	GO:0009407: toxin catabolic process	5.95E-03
106	GO:0051865: protein autoubiquitination	6.03E-03
107	GO:0046685: response to arsenic-containing substance	6.03E-03
108	GO:0010043: response to zinc ion	6.23E-03
109	GO:0019538: protein metabolic process	7.54E-03
110	GO:0006879: cellular iron ion homeostasis	8.35E-03
111	GO:0009750: response to fructose	8.35E-03
112	GO:0048229: gametophyte development	8.35E-03
113	GO:0000038: very long-chain fatty acid metabolic process	8.35E-03
114	GO:0006790: sulfur compound metabolic process	9.17E-03
115	GO:0012501: programmed cell death	9.17E-03
116	GO:0016925: protein sumoylation	9.17E-03
117	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.17E-03
118	GO:0010229: inflorescence development	1.00E-02
119	GO:0018107: peptidyl-threonine phosphorylation	1.00E-02
120	GO:0034605: cellular response to heat	1.09E-02
121	GO:0009266: response to temperature stimulus	1.09E-02
122	GO:0070588: calcium ion transmembrane transport	1.18E-02
123	GO:0046854: phosphatidylinositol phosphorylation	1.18E-02
124	GO:0010053: root epidermal cell differentiation	1.18E-02
125	GO:0009863: salicylic acid mediated signaling pathway	1.38E-02
126	GO:2000377: regulation of reactive oxygen species metabolic process	1.38E-02
127	GO:0048367: shoot system development	1.46E-02
128	GO:0009695: jasmonic acid biosynthetic process	1.48E-02
129	GO:0045893: positive regulation of transcription, DNA-templated	1.55E-02
130	GO:0006366: transcription from RNA polymerase II promoter	1.58E-02
131	GO:0009814: defense response, incompatible interaction	1.68E-02
132	GO:0016226: iron-sulfur cluster assembly	1.68E-02
133	GO:0015031: protein transport	1.75E-02
134	GO:0018105: peptidyl-serine phosphorylation	1.75E-02
135	GO:0010091: trichome branching	1.90E-02
136	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.01E-02
137	GO:0042147: retrograde transport, endosome to Golgi	2.01E-02
138	GO:0016117: carotenoid biosynthetic process	2.01E-02
139	GO:0042631: cellular response to water deprivation	2.13E-02
140	GO:0042391: regulation of membrane potential	2.13E-02
141	GO:0006885: regulation of pH	2.24E-02
142	GO:0006520: cellular amino acid metabolic process	2.24E-02
143	GO:0009058: biosynthetic process	2.25E-02
144	GO:0061025: membrane fusion	2.36E-02
145	GO:0008152: metabolic process	2.45E-02
146	GO:0010183: pollen tube guidance	2.48E-02
147	GO:0009749: response to glucose	2.48E-02
148	GO:0071554: cell wall organization or biogenesis	2.61E-02
149	GO:0006635: fatty acid beta-oxidation	2.61E-02
150	GO:0030163: protein catabolic process	2.86E-02
151	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.29E-02
152	GO:0007166: cell surface receptor signaling pathway	3.36E-02
153	GO:0009615: response to virus	3.39E-02
154	GO:0009816: defense response to bacterium, incompatible interaction	3.52E-02
155	GO:0009607: response to biotic stimulus	3.52E-02
156	GO:0016311: dephosphorylation	3.95E-02
157	GO:0006952: defense response	3.99E-02
158	GO:0009817: defense response to fungus, incompatible interaction	4.09E-02
159	GO:0048481: plant ovule development	4.09E-02
160	GO:0008219: cell death	4.09E-02
161	GO:0009813: flavonoid biosynthetic process	4.24E-02
162	GO:0048767: root hair elongation	4.24E-02
163	GO:0010119: regulation of stomatal movement	4.53E-02
164	GO:0006865: amino acid transport	4.69E-02
165	GO:0035556: intracellular signal transduction	4.72E-02
166	GO:0006970: response to osmotic stress	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0008777: acetylornithine deacetylase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
7	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
8	GO:1990837: sequence-specific double-stranded DNA binding	0.00E+00
9	GO:0004602: glutathione peroxidase activity	1.49E-04
10	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.63E-04
11	GO:0004321: fatty-acyl-CoA synthase activity	2.63E-04
12	GO:0016041: glutamate synthase (ferredoxin) activity	2.63E-04
13	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.63E-04
14	GO:0051213: dioxygenase activity	4.90E-04
15	GO:0004061: arylformamidase activity	5.78E-04
16	GO:0004385: guanylate kinase activity	5.78E-04
17	GO:0004103: choline kinase activity	5.78E-04
18	GO:0036455: iron-sulfur transferase activity	5.78E-04
19	GO:0015105: arsenite transmembrane transporter activity	5.78E-04
20	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.78E-04
21	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.22E-04
22	GO:0000975: regulatory region DNA binding	9.39E-04
23	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.39E-04
24	GO:0050833: pyruvate transmembrane transporter activity	9.39E-04
25	GO:0031683: G-protein beta/gamma-subunit complex binding	9.39E-04
26	GO:0001664: G-protein coupled receptor binding	9.39E-04
27	GO:0004364: glutathione transferase activity	1.20E-03
28	GO:0008276: protein methyltransferase activity	1.34E-03
29	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.34E-03
30	GO:0046715: borate transmembrane transporter activity	1.34E-03
31	GO:0003995: acyl-CoA dehydrogenase activity	1.79E-03
32	GO:0009916: alternative oxidase activity	1.79E-03
33	GO:0004301: epoxide hydrolase activity	1.79E-03
34	GO:0008198: ferrous iron binding	2.29E-03
35	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.29E-03
36	GO:0003997: acyl-CoA oxidase activity	2.29E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	2.29E-03
38	GO:0045431: flavonol synthase activity	2.29E-03
39	GO:0004526: ribonuclease P activity	2.82E-03
40	GO:0031369: translation initiation factor binding	2.82E-03
41	GO:0004866: endopeptidase inhibitor activity	2.82E-03
42	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.40E-03
43	GO:0051920: peroxiredoxin activity	3.40E-03
44	GO:0016831: carboxy-lyase activity	4.00E-03
45	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.00E-03
46	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.00E-03
47	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.00E-03
48	GO:0008320: protein transmembrane transporter activity	4.00E-03
49	GO:0043295: glutathione binding	4.00E-03
50	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.65E-03
51	GO:0004033: aldo-keto reductase (NADP) activity	4.65E-03
52	GO:0016209: antioxidant activity	4.65E-03
53	GO:0043565: sequence-specific DNA binding	5.76E-03
54	GO:0016207: 4-coumarate-CoA ligase activity	6.03E-03
55	GO:0016491: oxidoreductase activity	6.05E-03
56	GO:0016844: strictosidine synthase activity	6.77E-03
57	GO:0005516: calmodulin binding	6.90E-03
58	GO:0004713: protein tyrosine kinase activity	7.54E-03
59	GO:0008171: O-methyltransferase activity	7.54E-03
60	GO:0003680: AT DNA binding	8.35E-03
61	GO:0005543: phospholipid binding	8.35E-03
62	GO:0008794: arsenate reductase (glutaredoxin) activity	8.35E-03
63	GO:0046872: metal ion binding	9.34E-03
64	GO:0051537: 2 iron, 2 sulfur cluster binding	9.55E-03
65	GO:0005198: structural molecule activity	9.92E-03
66	GO:0005388: calcium-transporting ATPase activity	1.00E-02
67	GO:0004601: peroxidase activity	1.01E-02
68	GO:0004175: endopeptidase activity	1.09E-02
69	GO:0004190: aspartic-type endopeptidase activity	1.18E-02
70	GO:0030552: cAMP binding	1.18E-02
71	GO:0030553: cGMP binding	1.18E-02
72	GO:0008234: cysteine-type peptidase activity	1.32E-02
73	GO:0043130: ubiquitin binding	1.38E-02
74	GO:0005216: ion channel activity	1.48E-02
75	GO:0035251: UDP-glucosyltransferase activity	1.58E-02
76	GO:0004707: MAP kinase activity	1.58E-02
77	GO:0004298: threonine-type endopeptidase activity	1.58E-02
78	GO:0015035: protein disulfide oxidoreductase activity	1.75E-02
79	GO:0003727: single-stranded RNA binding	1.90E-02
80	GO:0004842: ubiquitin-protein transferase activity	2.01E-02
81	GO:0030551: cyclic nucleotide binding	2.13E-02
82	GO:0005451: monovalent cation:proton antiporter activity	2.13E-02
83	GO:0005249: voltage-gated potassium channel activity	2.13E-02
84	GO:0003924: GTPase activity	2.17E-02
85	GO:0008080: N-acetyltransferase activity	2.24E-02
86	GO:0015299: solute:proton antiporter activity	2.36E-02
87	GO:0016853: isomerase activity	2.36E-02
88	GO:0009055: electron carrier activity	2.37E-02
89	GO:0030170: pyridoxal phosphate binding	2.37E-02
90	GO:0019901: protein kinase binding	2.48E-02
91	GO:0005525: GTP binding	2.65E-02
92	GO:0004197: cysteine-type endopeptidase activity	2.73E-02
93	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.74E-02
94	GO:0015385: sodium:proton antiporter activity	2.86E-02
95	GO:0008237: metallopeptidase activity	3.12E-02
96	GO:0005509: calcium ion binding	3.19E-02
97	GO:0005515: protein binding	3.23E-02
98	GO:0016597: amino acid binding	3.25E-02
99	GO:0016413: O-acetyltransferase activity	3.25E-02
100	GO:0008194: UDP-glycosyltransferase activity	3.29E-02
101	GO:0015250: water channel activity	3.39E-02
102	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.66E-02
103	GO:0042802: identical protein binding	3.73E-02
104	GO:0004683: calmodulin-dependent protein kinase activity	3.80E-02
105	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.95E-02
106	GO:0008236: serine-type peptidase activity	3.95E-02
107	GO:0008168: methyltransferase activity	4.37E-02
108	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.53E-02
109	GO:0003697: single-stranded DNA binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0098687: chromosomal region	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0005771: multivesicular body	1.09E-04
4	GO:0005789: endoplasmic reticulum membrane	2.43E-04
5	GO:0030134: ER to Golgi transport vesicle	5.78E-04
6	GO:0005886: plasma membrane	8.08E-04
7	GO:0005783: endoplasmic reticulum	8.55E-04
8	GO:0005782: peroxisomal matrix	9.39E-04
9	GO:0030139: endocytic vesicle	9.39E-04
10	GO:0016328: lateral plasma membrane	9.39E-04
11	GO:0032585: multivesicular body membrane	1.34E-03
12	GO:0005770: late endosome	2.32E-03
13	GO:0030904: retromer complex	2.82E-03
14	GO:0000815: ESCRT III complex	3.40E-03
15	GO:0031305: integral component of mitochondrial inner membrane	4.65E-03
16	GO:0019773: proteasome core complex, alpha-subunit complex	5.32E-03
17	GO:0031901: early endosome membrane	6.03E-03
18	GO:0005829: cytosol	8.17E-03
19	GO:0005665: DNA-directed RNA polymerase II, core complex	9.17E-03
20	GO:0005750: mitochondrial respiratory chain complex III	1.09E-02
21	GO:0005764: lysosome	1.09E-02
22	GO:0005769: early endosome	1.28E-02
23	GO:0043234: protein complex	1.28E-02
24	GO:0070469: respiratory chain	1.48E-02
25	GO:0005777: peroxisome	1.55E-02
26	GO:0005741: mitochondrial outer membrane	1.58E-02
27	GO:0005839: proteasome core complex	1.58E-02
28	GO:0005623: cell	2.19E-02
29	GO:0043231: intracellular membrane-bounded organelle	2.45E-02
30	GO:0009504: cell plate	2.48E-02
31	GO:0005759: mitochondrial matrix	2.68E-02
32	GO:0032580: Golgi cisterna membrane	2.99E-02
33	GO:0005887: integral component of plasma membrane	3.18E-02
34	GO:0000932: P-body	3.39E-02
35	GO:0009707: chloroplast outer membrane	4.09E-02