Gene: AT5G39040
     

Gene description


TAIR ID: AT5G39040

Short description: transporter associated with antigen processing protein 2

Pathogen responsiveness: -0.96

General responsiveness: -1.43

GO biological process


transmembrane transport, response to aluminum ion


GO cellular component


plant-type vacuole, vacuolar membrane, vacuole, integral component of membrane, plasma membrane


GO molecular function


ATP binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity


Protein domain


PfamPF00664, ABC transporter transmembrane region
PfamPF00005, ABC transporter
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.749.46E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.372.06E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.945.27E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.111.24E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.925.48E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.576.66E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.061.15E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.644.39E-12
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.622.84E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.916.94E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.572.77E-03






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