Gene: AT5G20030
     

Gene description


TAIR ID: AT5G20030

Short description: Plant Tudor-like RNA-binding protein

Pathogen responsiveness: -2.11

General responsiveness: -3.31

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.9487.1.S1_AT  TAAFFX.9487.1.S1_S_AT  


GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF03735, ENT domain
PfamPF05641, Agenet domain
SMARTSM00743, Agenet
SMARTSM01191, ENT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G56110, AT5G07100, AT3G14230, AT1G62300, AT5G22570, AT2G46130, AT2G20180, AT4G31550

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.242.77E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.097.19E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.787.85E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.921.76E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.502.87E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.