co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G20030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070979: protein K11-linked ubiquitination	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0006573: valine metabolic process	0.00E+00
4	GO:0045184: establishment of protein localization	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
7	GO:0080127: fruit septum development	0.00E+00
8	GO:0000373: Group II intron splicing	3.88E-07
9	GO:0006551: leucine metabolic process	3.52E-04
10	GO:0043087: regulation of GTPase activity	3.52E-04
11	GO:2000021: regulation of ion homeostasis	3.52E-04
12	GO:0035987: endodermal cell differentiation	3.52E-04
13	GO:0006436: tryptophanyl-tRNA aminoacylation	3.52E-04
14	GO:0090548: response to nitrate starvation	3.52E-04
15	GO:0000066: mitochondrial ornithine transport	3.52E-04
16	GO:0034757: negative regulation of iron ion transport	3.52E-04
17	GO:0042659: regulation of cell fate specification	3.52E-04
18	GO:0090558: plant epidermis development	3.52E-04
19	GO:0009090: homoserine biosynthetic process	3.52E-04
20	GO:1902025: nitrate import	3.52E-04
21	GO:0019478: D-amino acid catabolic process	3.52E-04
22	GO:0000012: single strand break repair	3.52E-04
23	GO:0043266: regulation of potassium ion transport	3.52E-04
24	GO:0010271: regulation of chlorophyll catabolic process	7.67E-04
25	GO:0006432: phenylalanyl-tRNA aminoacylation	7.67E-04
26	GO:0010582: floral meristem determinacy	1.02E-03
27	GO:0030029: actin filament-based process	1.24E-03
28	GO:0031022: nuclear migration along microfilament	1.24E-03
29	GO:0090708: specification of plant organ axis polarity	1.24E-03
30	GO:0080117: secondary growth	1.24E-03
31	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.24E-03
32	GO:0009067: aspartate family amino acid biosynthetic process	1.79E-03
33	GO:0051513: regulation of monopolar cell growth	1.79E-03
34	GO:0009102: biotin biosynthetic process	1.79E-03
35	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.79E-03
36	GO:0051639: actin filament network formation	1.79E-03
37	GO:0034059: response to anoxia	1.79E-03
38	GO:0010239: chloroplast mRNA processing	1.79E-03
39	GO:0044211: CTP salvage	1.79E-03
40	GO:0042989: sequestering of actin monomers	1.79E-03
41	GO:0009800: cinnamic acid biosynthetic process	1.79E-03
42	GO:2000904: regulation of starch metabolic process	1.79E-03
43	GO:0009451: RNA modification	2.17E-03
44	GO:0051764: actin crosslink formation	2.40E-03
45	GO:0030104: water homeostasis	2.40E-03
46	GO:0008295: spermidine biosynthetic process	2.40E-03
47	GO:0044206: UMP salvage	2.40E-03
48	GO:0009904: chloroplast accumulation movement	3.07E-03
49	GO:0016123: xanthophyll biosynthetic process	3.07E-03
50	GO:0010158: abaxial cell fate specification	3.07E-03
51	GO:0032876: negative regulation of DNA endoreduplication	3.07E-03
52	GO:0009696: salicylic acid metabolic process	3.07E-03
53	GO:0080110: sporopollenin biosynthetic process	3.07E-03
54	GO:0016131: brassinosteroid metabolic process	3.07E-03
55	GO:0030041: actin filament polymerization	3.07E-03
56	GO:0010087: phloem or xylem histogenesis	3.31E-03
57	GO:0016554: cytidine to uridine editing	3.79E-03
58	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.79E-03
59	GO:0006559: L-phenylalanine catabolic process	3.79E-03
60	GO:0006206: pyrimidine nucleobase metabolic process	3.79E-03
61	GO:0048831: regulation of shoot system development	3.79E-03
62	GO:0010190: cytochrome b6f complex assembly	3.79E-03
63	GO:0003006: developmental process involved in reproduction	3.79E-03
64	GO:0007018: microtubule-based movement	3.83E-03
65	GO:0009099: valine biosynthetic process	4.57E-03
66	GO:0009903: chloroplast avoidance movement	4.57E-03
67	GO:0009088: threonine biosynthetic process	4.57E-03
68	GO:0009648: photoperiodism	4.57E-03
69	GO:2000067: regulation of root morphogenesis	4.57E-03
70	GO:0042372: phylloquinone biosynthetic process	4.57E-03
71	GO:0009082: branched-chain amino acid biosynthetic process	4.57E-03
72	GO:0048509: regulation of meristem development	4.57E-03
73	GO:0051510: regulation of unidimensional cell growth	5.40E-03
74	GO:0006955: immune response	5.40E-03
75	GO:0010050: vegetative phase change	5.40E-03
76	GO:0010098: suspensor development	5.40E-03
77	GO:0032875: regulation of DNA endoreduplication	6.27E-03
78	GO:0045010: actin nucleation	6.27E-03
79	GO:0055075: potassium ion homeostasis	6.27E-03
80	GO:0006353: DNA-templated transcription, termination	6.27E-03
81	GO:0070413: trehalose metabolism in response to stress	6.27E-03
82	GO:0009850: auxin metabolic process	6.27E-03
83	GO:0032544: plastid translation	7.19E-03
84	GO:0071482: cellular response to light stimulus	7.19E-03
85	GO:0009827: plant-type cell wall modification	7.19E-03
86	GO:0009657: plastid organization	7.19E-03
87	GO:0009097: isoleucine biosynthetic process	7.19E-03
88	GO:0048507: meristem development	8.16E-03
89	GO:0030244: cellulose biosynthetic process	8.33E-03
90	GO:0000160: phosphorelay signal transduction system	8.75E-03
91	GO:0016573: histone acetylation	9.17E-03
92	GO:0009098: leucine biosynthetic process	9.17E-03
93	GO:0010018: far-red light signaling pathway	9.17E-03
94	GO:0009086: methionine biosynthetic process	9.17E-03
95	GO:1900865: chloroplast RNA modification	9.17E-03
96	GO:2000280: regulation of root development	9.17E-03
97	GO:0016571: histone methylation	9.17E-03
98	GO:0040008: regulation of growth	9.47E-03
99	GO:0006259: DNA metabolic process	1.02E-02
100	GO:0010192: mucilage biosynthetic process	1.02E-02
101	GO:0006535: cysteine biosynthetic process from serine	1.02E-02
102	GO:0006265: DNA topological change	1.13E-02
103	GO:0009089: lysine biosynthetic process via diaminopimelate	1.13E-02
104	GO:0007166: cell surface receptor signaling pathway	1.19E-02
105	GO:0045037: protein import into chloroplast stroma	1.25E-02
106	GO:0030036: actin cytoskeleton organization	1.37E-02
107	GO:0008283: cell proliferation	1.37E-02
108	GO:0009691: cytokinin biosynthetic process	1.37E-02
109	GO:0009266: response to temperature stimulus	1.49E-02
110	GO:0006302: double-strand break repair	1.49E-02
111	GO:0048467: gynoecium development	1.49E-02
112	GO:0010020: chloroplast fission	1.49E-02
113	GO:0009636: response to toxic substance	1.54E-02
114	GO:0090351: seedling development	1.61E-02
115	GO:0006863: purine nucleobase transport	1.74E-02
116	GO:0009833: plant-type primary cell wall biogenesis	1.74E-02
117	GO:0006833: water transport	1.74E-02
118	GO:0042753: positive regulation of circadian rhythm	1.74E-02
119	GO:0009658: chloroplast organization	1.75E-02
120	GO:0006364: rRNA processing	1.85E-02
121	GO:0009736: cytokinin-activated signaling pathway	1.85E-02
122	GO:0051017: actin filament bundle assembly	1.88E-02
123	GO:0006289: nucleotide-excision repair	1.88E-02
124	GO:0005992: trehalose biosynthetic process	1.88E-02
125	GO:0019344: cysteine biosynthetic process	1.88E-02
126	GO:0030150: protein import into mitochondrial matrix	1.88E-02
127	GO:0006338: chromatin remodeling	1.88E-02
128	GO:0007010: cytoskeleton organization	1.88E-02
129	GO:0051302: regulation of cell division	2.01E-02
130	GO:0006418: tRNA aminoacylation for protein translation	2.01E-02
131	GO:0016998: cell wall macromolecule catabolic process	2.15E-02
132	GO:0048316: seed development	2.26E-02
133	GO:0016226: iron-sulfur cluster assembly	2.29E-02
134	GO:0035428: hexose transmembrane transport	2.29E-02
135	GO:0071215: cellular response to abscisic acid stimulus	2.44E-02
136	GO:0010584: pollen exine formation	2.59E-02
137	GO:0016117: carotenoid biosynthetic process	2.74E-02
138	GO:0070417: cellular response to cold	2.74E-02
139	GO:0008033: tRNA processing	2.90E-02
140	GO:0010182: sugar mediated signaling pathway	3.06E-02
141	GO:0046323: glucose import	3.06E-02
142	GO:0009741: response to brassinosteroid	3.06E-02
143	GO:0010268: brassinosteroid homeostasis	3.06E-02
144	GO:0045489: pectin biosynthetic process	3.06E-02
145	GO:0009958: positive gravitropism	3.06E-02
146	GO:0007059: chromosome segregation	3.22E-02
147	GO:0048544: recognition of pollen	3.22E-02
148	GO:0009058: biosynthetic process	3.47E-02
149	GO:0000302: response to reactive oxygen species	3.55E-02
150	GO:0009845: seed germination	3.56E-02
151	GO:0007264: small GTPase mediated signal transduction	3.72E-02
152	GO:0010583: response to cyclopentenone	3.72E-02
153	GO:0016032: viral process	3.72E-02
154	GO:0009790: embryo development	3.84E-02
155	GO:0010090: trichome morphogenesis	3.90E-02
156	GO:0009793: embryo development ending in seed dormancy	4.06E-02
157	GO:0009639: response to red or far red light	4.07E-02
158	GO:0006633: fatty acid biosynthetic process	4.13E-02
159	GO:0051607: defense response to virus	4.43E-02
160	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.80E-02
161	GO:0010029: regulation of seed germination	4.80E-02
162	GO:0009627: systemic acquired resistance	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
4	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
5	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
6	GO:0001872: (1->3)-beta-D-glucan binding	4.34E-05
7	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.52E-04
8	GO:0004830: tryptophan-tRNA ligase activity	3.52E-04
9	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	3.52E-04
10	GO:0042834: peptidoglycan binding	3.52E-04
11	GO:0080042: ADP-glucose pyrophosphohydrolase activity	3.52E-04
12	GO:0005290: L-histidine transmembrane transporter activity	3.52E-04
13	GO:0052381: tRNA dimethylallyltransferase activity	3.52E-04
14	GO:0003984: acetolactate synthase activity	3.52E-04
15	GO:0008395: steroid hydroxylase activity	3.52E-04
16	GO:0050017: L-3-cyanoalanine synthase activity	7.67E-04
17	GO:0003852: 2-isopropylmalate synthase activity	7.67E-04
18	GO:0080041: ADP-ribose pyrophosphohydrolase activity	7.67E-04
19	GO:0004047: aminomethyltransferase activity	7.67E-04
20	GO:0004766: spermidine synthase activity	7.67E-04
21	GO:0008805: carbon-monoxide oxygenase activity	7.67E-04
22	GO:0000064: L-ornithine transmembrane transporter activity	7.67E-04
23	GO:0004826: phenylalanine-tRNA ligase activity	7.67E-04
24	GO:0004412: homoserine dehydrogenase activity	7.67E-04
25	GO:0050736: O-malonyltransferase activity	7.67E-04
26	GO:0009884: cytokinin receptor activity	7.67E-04
27	GO:0005034: osmosensor activity	1.24E-03
28	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.24E-03
29	GO:0045548: phenylalanine ammonia-lyase activity	1.24E-03
30	GO:0004148: dihydrolipoyl dehydrogenase activity	1.24E-03
31	GO:0005096: GTPase activator activity	1.25E-03
32	GO:0080031: methyl salicylate esterase activity	1.79E-03
33	GO:0015189: L-lysine transmembrane transporter activity	1.79E-03
34	GO:0004072: aspartate kinase activity	1.79E-03
35	GO:0015181: arginine transmembrane transporter activity	1.79E-03
36	GO:0017172: cysteine dioxygenase activity	1.79E-03
37	GO:0042277: peptide binding	2.40E-03
38	GO:0004845: uracil phosphoribosyltransferase activity	2.40E-03
39	GO:0070628: proteasome binding	2.40E-03
40	GO:0004519: endonuclease activity	3.07E-03
41	GO:0005471: ATP:ADP antiporter activity	3.07E-03
42	GO:0003785: actin monomer binding	3.07E-03
43	GO:0003690: double-stranded DNA binding	3.33E-03
44	GO:0080030: methyl indole-3-acetate esterase activity	3.79E-03
45	GO:0004709: MAP kinase kinase kinase activity	3.79E-03
46	GO:0031593: polyubiquitin binding	3.79E-03
47	GO:0004656: procollagen-proline 4-dioxygenase activity	4.57E-03
48	GO:0019900: kinase binding	4.57E-03
49	GO:0004124: cysteine synthase activity	4.57E-03
50	GO:0004849: uridine kinase activity	4.57E-03
51	GO:0003723: RNA binding	4.73E-03
52	GO:0016597: amino acid binding	6.02E-03
53	GO:0043022: ribosome binding	6.27E-03
54	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.19E-03
55	GO:0030247: polysaccharide binding	7.51E-03
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.19E-03
57	GO:0004805: trehalose-phosphatase activity	1.02E-02
58	GO:0016740: transferase activity	1.02E-02
59	GO:0004673: protein histidine kinase activity	1.02E-02
60	GO:0003697: single-stranded DNA binding	1.06E-02
61	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.13E-02
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.17E-02
63	GO:0000049: tRNA binding	1.25E-02
64	GO:0000155: phosphorelay sensor kinase activity	1.37E-02
65	GO:0009982: pseudouridine synthase activity	1.37E-02
66	GO:0015266: protein channel activity	1.37E-02
67	GO:0043621: protein self-association	1.48E-02
68	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.74E-02
69	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.74E-02
70	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.74E-02
71	GO:0031418: L-ascorbic acid binding	1.88E-02
72	GO:0043130: ubiquitin binding	1.88E-02
73	GO:0051087: chaperone binding	2.01E-02
74	GO:0043424: protein histidine kinase binding	2.01E-02
75	GO:0005345: purine nucleobase transmembrane transporter activity	2.01E-02
76	GO:0003777: microtubule motor activity	2.05E-02
77	GO:0016760: cellulose synthase (UDP-forming) activity	2.44E-02
78	GO:0004812: aminoacyl-tRNA ligase activity	2.74E-02
79	GO:0004527: exonuclease activity	3.06E-02
80	GO:0010181: FMN binding	3.22E-02
81	GO:0005355: glucose transmembrane transporter activity	3.22E-02
82	GO:0050662: coenzyme binding	3.22E-02
83	GO:0019843: rRNA binding	3.29E-02
84	GO:0019901: protein kinase binding	3.39E-02
85	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.55E-02
86	GO:0030170: pyridoxal phosphate binding	3.65E-02
87	GO:0004518: nuclease activity	3.72E-02
88	GO:0003924: GTPase activity	3.73E-02
89	GO:0016491: oxidoreductase activity	3.85E-02
90	GO:0051015: actin filament binding	3.90E-02
91	GO:0000156: phosphorelay response regulator activity	3.90E-02
92	GO:0016759: cellulose synthase activity	4.07E-02
93	GO:0003684: damaged DNA binding	4.07E-02
94	GO:0016791: phosphatase activity	4.07E-02
95	GO:0005200: structural constituent of cytoskeleton	4.25E-02
96	GO:0008483: transaminase activity	4.25E-02
97	GO:0016413: O-acetyltransferase activity	4.43E-02
98	GO:0005525: GTP binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0000408: EKC/KEOPS complex	0.00E+00
4	GO:0009537: proplastid	0.00E+00
5	GO:0009507: chloroplast	9.34E-10
6	GO:0009570: chloroplast stroma	4.87E-04
7	GO:0009513: etioplast	7.67E-04
8	GO:0009509: chromoplast	1.24E-03
9	GO:0032432: actin filament bundle	1.79E-03
10	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.40E-03
11	GO:0005871: kinesin complex	3.06E-03
12	GO:0031209: SCAR complex	3.79E-03
13	GO:0031305: integral component of mitochondrial inner membrane	6.27E-03
14	GO:0048226: Casparian strip	6.27E-03
15	GO:0009501: amyloplast	6.27E-03
16	GO:0030529: intracellular ribonucleoprotein complex	6.37E-03
17	GO:0005680: anaphase-promoting complex	8.16E-03
18	GO:0009707: chloroplast outer membrane	8.33E-03
19	GO:0005759: mitochondrial matrix	8.91E-03
20	GO:0016604: nuclear body	9.17E-03
21	GO:0005884: actin filament	1.13E-02
22	GO:0005938: cell cortex	1.37E-02
23	GO:0016602: CCAAT-binding factor complex	1.37E-02
24	GO:0009574: preprophase band	1.37E-02
25	GO:0046658: anchored component of plasma membrane	1.44E-02
26	GO:0030095: chloroplast photosystem II	1.49E-02
27	GO:0009654: photosystem II oxygen evolving complex	2.01E-02
28	GO:0042651: thylakoid membrane	2.01E-02
29	GO:0009532: plastid stroma	2.15E-02
30	GO:0031969: chloroplast membrane	2.30E-02
31	GO:0015629: actin cytoskeleton	2.44E-02
32	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.59E-02
33	GO:0005623: cell	3.38E-02
34	GO:0019898: extrinsic component of membrane	3.39E-02
35	GO:0031965: nuclear membrane	3.39E-02
36	GO:0009295: nucleoid	4.25E-02