GO Enrichment Analysis of Co-expressed Genes with
AT5G16140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0006400: tRNA modification | 1.52E-05 |
| 4 | GO:0006427: histidyl-tRNA aminoacylation | 5.18E-05 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 5.75E-05 |
| 6 | GO:0015979: photosynthesis | 1.07E-04 |
| 7 | GO:0010024: phytochromobilin biosynthetic process | 1.27E-04 |
| 8 | GO:0010581: regulation of starch biosynthetic process | 2.17E-04 |
| 9 | GO:0006788: heme oxidation | 2.17E-04 |
| 10 | GO:2001141: regulation of RNA biosynthetic process | 3.17E-04 |
| 11 | GO:0009152: purine ribonucleotide biosynthetic process | 3.17E-04 |
| 12 | GO:0046653: tetrahydrofolate metabolic process | 3.17E-04 |
| 13 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 14 | GO:0080110: sporopollenin biosynthetic process | 5.39E-04 |
| 15 | GO:0031365: N-terminal protein amino acid modification | 5.39E-04 |
| 16 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.87E-04 |
| 17 | GO:0048564: photosystem I assembly | 1.06E-03 |
| 18 | GO:0009657: plastid organization | 1.20E-03 |
| 19 | GO:0019430: removal of superoxide radicals | 1.20E-03 |
| 20 | GO:0071482: cellular response to light stimulus | 1.20E-03 |
| 21 | GO:0006098: pentose-phosphate shunt | 1.35E-03 |
| 22 | GO:0000373: Group II intron splicing | 1.35E-03 |
| 23 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.50E-03 |
| 24 | GO:0043085: positive regulation of catalytic activity | 1.84E-03 |
| 25 | GO:0006352: DNA-templated transcription, initiation | 1.84E-03 |
| 26 | GO:0010628: positive regulation of gene expression | 2.19E-03 |
| 27 | GO:0006094: gluconeogenesis | 2.19E-03 |
| 28 | GO:0009561: megagametogenesis | 4.03E-03 |
| 29 | GO:0010584: pollen exine formation | 4.03E-03 |
| 30 | GO:0019761: glucosinolate biosynthetic process | 5.71E-03 |
| 31 | GO:0001666: response to hypoxia | 7.04E-03 |
| 32 | GO:0010027: thylakoid membrane organization | 7.04E-03 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 7.88E-03 |
| 34 | GO:0032259: methylation | 8.59E-03 |
| 35 | GO:0008152: metabolic process | 9.89E-03 |
| 36 | GO:0009637: response to blue light | 9.99E-03 |
| 37 | GO:0009853: photorespiration | 9.99E-03 |
| 38 | GO:0030001: metal ion transport | 1.09E-02 |
| 39 | GO:0010114: response to red light | 1.19E-02 |
| 40 | GO:0009735: response to cytokinin | 1.46E-02 |
| 41 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.51E-02 |
| 42 | GO:0006096: glycolytic process | 1.66E-02 |
| 43 | GO:0009058: biosynthetic process | 2.31E-02 |
| 44 | GO:0042744: hydrogen peroxide catabolic process | 2.44E-02 |
| 45 | GO:0006508: proteolysis | 2.68E-02 |
| 46 | GO:0009451: RNA modification | 2.84E-02 |
| 47 | GO:0055114: oxidation-reduction process | 3.28E-02 |
| 48 | GO:0009658: chloroplast organization | 3.81E-02 |
| 49 | GO:0006810: transport | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0004821: histidine-tRNA ligase activity | 5.18E-05 |
| 3 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 5.18E-05 |
| 4 | GO:0016630: protochlorophyllide reductase activity | 1.27E-04 |
| 5 | GO:0047746: chlorophyllase activity | 1.27E-04 |
| 6 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.17E-04 |
| 7 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.17E-04 |
| 8 | GO:0016987: sigma factor activity | 4.24E-04 |
| 9 | GO:0004392: heme oxygenase (decyclizing) activity | 4.24E-04 |
| 10 | GO:0001053: plastid sigma factor activity | 4.24E-04 |
| 11 | GO:0003959: NADPH dehydrogenase activity | 5.39E-04 |
| 12 | GO:0004332: fructose-bisphosphate aldolase activity | 6.60E-04 |
| 13 | GO:0008235: metalloexopeptidase activity | 9.18E-04 |
| 14 | GO:0008047: enzyme activator activity | 1.67E-03 |
| 15 | GO:0004177: aminopeptidase activity | 1.84E-03 |
| 16 | GO:0031072: heat shock protein binding | 2.19E-03 |
| 17 | GO:0019843: rRNA binding | 2.32E-03 |
| 18 | GO:0005528: FK506 binding | 2.96E-03 |
| 19 | GO:0051087: chaperone binding | 3.16E-03 |
| 20 | GO:0016787: hydrolase activity | 3.90E-03 |
| 21 | GO:0008168: methyltransferase activity | 4.72E-03 |
| 22 | GO:0050662: coenzyme binding | 4.96E-03 |
| 23 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 24 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 25 | GO:0051213: dioxygenase activity | 7.04E-03 |
| 26 | GO:0003824: catalytic activity | 7.30E-03 |
| 27 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 9.36E-03 |
| 28 | GO:0009055: electron carrier activity | 9.62E-03 |
| 29 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.99E-03 |
| 30 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.09E-02 |
| 31 | GO:0004185: serine-type carboxypeptidase activity | 1.19E-02 |
| 32 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.33E-02 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.47E-02 |
| 34 | GO:0046872: metal ion binding | 1.81E-02 |
| 35 | GO:0051082: unfolded protein binding | 1.89E-02 |
| 36 | GO:0003723: RNA binding | 2.73E-02 |
| 37 | GO:0005509: calcium ion binding | 2.99E-02 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 4.23E-02 |
| 40 | GO:0016491: oxidoreductase activity | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.86E-22 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 7.69E-10 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 8.60E-09 |
| 4 | GO:0031977: thylakoid lumen | 1.61E-06 |
| 5 | GO:0009570: chloroplast stroma | 1.85E-06 |
| 6 | GO:0009941: chloroplast envelope | 4.22E-06 |
| 7 | GO:0009579: thylakoid | 5.91E-06 |
| 8 | GO:0009534: chloroplast thylakoid | 6.07E-06 |
| 9 | GO:0000312: plastid small ribosomal subunit | 9.00E-05 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 1.45E-04 |
| 11 | GO:0019898: extrinsic component of membrane | 3.13E-04 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.35E-03 |
| 13 | GO:0030095: chloroplast photosystem II | 2.38E-03 |
| 14 | GO:0022627: cytosolic small ribosomal subunit | 4.20E-03 |
| 15 | GO:0030529: intracellular ribonucleoprotein complex | 7.04E-03 |
| 16 | GO:0005759: mitochondrial matrix | 2.61E-02 |
| 17 | GO:0031969: chloroplast membrane | 4.44E-02 |