gene detail

Gene description

TAIR ID: AT5G11450

Short description: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

Pathogen responsiveness: -0.22

General responsiveness: 1.07

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G000256

Wheat:

TA.28015.1.S1_AT

GO biological process

photosynthesis

GO cellular component

chloroplast thylakoid lumen, chloroplast thylakoid membrane, thylakoid, chloroplast, photosystem II oxygen evolving complex, extrinsic component of membrane, thylakoid lumen

GO molecular function

calcium ion binding

Protein domain

Pfam	PF01789, PsbP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.76	2.80E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.35	1.38E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.81	1.88E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.96	4.48E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.81	6.60E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.00	1.13E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.75	9.78E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.80	4.60E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.52	2.71E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.03	1.65E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.66	4.55E-03
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	-1.52	9.01E-08
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.60	2.38E-03