gene detail

Gene description

TAIR ID: AT5G08130

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -1.62

General responsiveness: -1.70

Orthologous

Rice:

OS09G0475400

Maize:

GRMZM2G089501

Wheat:

TA.9648.1.A1_AT

GO biological process

transcription, DNA-templated, regulation of transcription, brassinosteroid mediated signaling pathway, positive regulation of shade avoidance

GO cellular component

nucleus

GO molecular function

DNA binding, protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G13790, AT5G22570, AT2G46130, AT1G24260, AT2G20180, AT2G43010

Target:
AT4G38850

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.05	1.16E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	3.08E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.59	3.32E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.55	1.82E-03