Gene: AT5G08050
     

Gene description


TAIR ID: AT5G08050

Short description: Protein of unknown function (DUF1118)

Pathogen responsiveness: 0.50

General responsiveness: 2.34

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G074393  

Wheat: No orthologous gene

GO biological process


response to karrikin, chloroplast organization, positive regulation of transcription, DNA-templated, thylakoid membrane organization, granum assembly, nonphotochemical quenching


GO cellular component


chloroplast thylakoid, chloroplast thylakoid membrane, granal stacked thylakoid, chloroplast, thylakoid, integral component of membrane


GO molecular function


molecular_function


Protein domain


PfamPF06549, Protein of unknown function (DUF1118)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


32 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.541.28E-06
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.618.98E-04
GSE17464Laer, controlLaer, Flg22 2 h-1.524.43E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.572.62E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.609.58E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.951.28E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.705.45E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.172.83E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.512.13E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.995.10E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.024.78E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.257.17E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.524.37E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.731.16E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.681.18E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.061.69E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.807.99E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.001.10E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.528.63E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.631.51E-12
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.611.66E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.081.14E-08
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.562.76E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.081.03E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.661.22E-12
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.165.02E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.924.26E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.977.85E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.631.67E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.522.16E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.002.96E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.193.12E-03






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