co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0005996: monosaccharide metabolic process	0.00E+00
3	GO:0035674: tricarboxylic acid transmembrane transport	0.00E+00
4	GO:0015979: photosynthesis	1.22E-09
5	GO:0015995: chlorophyll biosynthetic process	1.88E-08
6	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.70E-07
7	GO:0006000: fructose metabolic process	1.03E-06
8	GO:0009773: photosynthetic electron transport in photosystem I	1.11E-06
9	GO:0055114: oxidation-reduction process	1.15E-05
10	GO:0006002: fructose 6-phosphate metabolic process	4.07E-05
11	GO:0006633: fatty acid biosynthetic process	4.25E-05
12	GO:0010206: photosystem II repair	5.07E-05
13	GO:0006835: dicarboxylic acid transport	6.91E-05
14	GO:0005983: starch catabolic process	1.03E-04
15	GO:0006094: gluconeogenesis	1.19E-04
16	GO:0005986: sucrose biosynthetic process	1.19E-04
17	GO:0019253: reductive pentose-phosphate cycle	1.36E-04
18	GO:0010353: response to trehalose	1.66E-04
19	GO:0006636: unsaturated fatty acid biosynthetic process	1.74E-04
20	GO:0061077: chaperone-mediated protein folding	2.38E-04
21	GO:0090391: granum assembly	2.81E-04
22	GO:0006518: peptide metabolic process	2.81E-04
23	GO:0006081: cellular aldehyde metabolic process	2.81E-04
24	GO:0045727: positive regulation of translation	5.42E-04
25	GO:0016311: dephosphorylation	8.51E-04
26	GO:0006810: transport	8.71E-04
27	GO:0010189: vitamin E biosynthetic process	9.99E-04
28	GO:0009631: cold acclimation	1.02E-03
29	GO:0009610: response to symbiotic fungus	1.17E-03
30	GO:0009772: photosynthetic electron transport in photosystem II	1.17E-03
31	GO:0010196: nonphotochemical quenching	1.17E-03
32	GO:0009642: response to light intensity	1.34E-03
33	GO:0030091: protein repair	1.34E-03
34	GO:0032544: plastid translation	1.53E-03
35	GO:0009245: lipid A biosynthetic process	1.73E-03
36	GO:0006754: ATP biosynthetic process	1.73E-03
37	GO:0010205: photoinhibition	1.93E-03
38	GO:0072593: reactive oxygen species metabolic process	2.36E-03
39	GO:0043085: positive regulation of catalytic activity	2.36E-03
40	GO:0000272: polysaccharide catabolic process	2.36E-03
41	GO:0009750: response to fructose	2.36E-03
42	GO:0018119: peptidyl-cysteine S-nitrosylation	2.36E-03
43	GO:0006006: glucose metabolic process	2.82E-03
44	GO:0010143: cutin biosynthetic process	3.06E-03
45	GO:0009266: response to temperature stimulus	3.06E-03
46	GO:0005985: sucrose metabolic process	3.30E-03
47	GO:0010025: wax biosynthetic process	3.56E-03
48	GO:0009768: photosynthesis, light harvesting in photosystem I	4.08E-03
49	GO:0070417: cellular response to cold	5.50E-03
50	GO:0042631: cellular response to water deprivation	5.80E-03
51	GO:0042335: cuticle development	5.80E-03
52	GO:0006662: glycerol ether metabolic process	6.11E-03
53	GO:0015986: ATP synthesis coupled proton transport	6.42E-03
54	GO:0055072: iron ion homeostasis	6.74E-03
55	GO:0009658: chloroplast organization	7.13E-03
56	GO:0010027: thylakoid membrane organization	9.13E-03
57	GO:0009627: systemic acquired resistance	9.87E-03
58	GO:0045454: cell redox homeostasis	1.06E-02
59	GO:0006979: response to oxidative stress	1.06E-02
60	GO:0018298: protein-chromophore linkage	1.10E-02
61	GO:0010311: lateral root formation	1.14E-02
62	GO:0006869: lipid transport	1.16E-02
63	GO:0010218: response to far red light	1.18E-02
64	GO:0032259: methylation	1.25E-02
65	GO:0009637: response to blue light	1.30E-02
66	GO:0034599: cellular response to oxidative stress	1.34E-02
67	GO:0006839: mitochondrial transport	1.43E-02
68	GO:0006631: fatty acid metabolic process	1.47E-02
69	GO:0009409: response to cold	1.54E-02
70	GO:0010114: response to red light	1.56E-02
71	GO:0006812: cation transport	1.83E-02
72	GO:0006364: rRNA processing	1.92E-02
73	GO:0009735: response to cytokinin	2.13E-02
74	GO:0006096: glycolytic process	2.17E-02
75	GO:0007623: circadian rhythm	3.65E-02
76	GO:0010150: leaf senescence	3.65E-02
77	GO:0010468: regulation of gene expression	4.14E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0015142: tricarboxylic acid transmembrane transporter activity	0.00E+00
5	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.70E-07
6	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.19E-05
7	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	6.91E-05
8	GO:0050521: alpha-glucan, water dikinase activity	6.91E-05
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	6.91E-05
10	GO:0045485: omega-6 fatty acid desaturase activity	6.91E-05
11	GO:0031957: very long-chain fatty acid-CoA ligase activity	6.91E-05
12	GO:0051537: 2 iron, 2 sulfur cluster binding	1.27E-04
13	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.66E-04
14	GO:0018708: thiol S-methyltransferase activity	1.66E-04
15	GO:0016630: protochlorophyllide reductase activity	1.66E-04
16	GO:0042389: omega-3 fatty acid desaturase activity	1.66E-04
17	GO:0010297: heteropolysaccharide binding	1.66E-04
18	GO:0005528: FK506 binding	1.94E-04
19	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.81E-04
20	GO:0005310: dicarboxylic acid transmembrane transporter activity	2.81E-04
21	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	2.81E-04
22	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.81E-04
23	GO:0017077: oxidative phosphorylation uncoupler activity	4.06E-04
24	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.06E-04
25	GO:0016851: magnesium chelatase activity	4.06E-04
26	GO:0004029: aldehyde dehydrogenase (NAD) activity	8.40E-04
27	GO:0031177: phosphopantetheine binding	8.40E-04
28	GO:0008200: ion channel inhibitor activity	8.40E-04
29	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	9.99E-04
30	GO:0102391: decanoate--CoA ligase activity	9.99E-04
31	GO:0000035: acyl binding	9.99E-04
32	GO:0004602: glutathione peroxidase activity	9.99E-04
33	GO:0004467: long-chain fatty acid-CoA ligase activity	1.17E-03
34	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.34E-03
35	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.53E-03
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.65E-03
37	GO:0008047: enzyme activator activity	2.14E-03
38	GO:0030234: enzyme regulator activity	2.14E-03
39	GO:0044183: protein binding involved in protein folding	2.36E-03
40	GO:0015035: protein disulfide oxidoreductase activity	2.77E-03
41	GO:0004565: beta-galactosidase activity	2.82E-03
42	GO:0031072: heat shock protein binding	2.82E-03
43	GO:0016491: oxidoreductase activity	3.33E-03
44	GO:0019843: rRNA binding	3.36E-03
45	GO:0031409: pigment binding	3.56E-03
46	GO:0003756: protein disulfide isomerase activity	5.20E-03
47	GO:0047134: protein-disulfide reductase activity	5.50E-03
48	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	6.11E-03
49	GO:0004791: thioredoxin-disulfide reductase activity	6.42E-03
50	GO:0050662: coenzyme binding	6.42E-03
51	GO:0046872: metal ion binding	6.79E-03
52	GO:0008168: methyltransferase activity	6.87E-03
53	GO:0048038: quinone binding	7.07E-03
54	GO:0016788: hydrolase activity, acting on ester bonds	7.27E-03
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.73E-03
56	GO:0016168: chlorophyll binding	9.50E-03
57	GO:0004222: metalloendopeptidase activity	1.18E-02
58	GO:0003993: acid phosphatase activity	1.34E-02
59	GO:0050661: NADP binding	1.43E-02
60	GO:0051287: NAD binding	1.78E-02
61	GO:0008289: lipid binding	1.82E-02
62	GO:0051082: unfolded protein binding	2.47E-02
63	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.96E-02
64	GO:0015297: antiporter activity	3.53E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	4.15E-23
2	GO:0009535: chloroplast thylakoid membrane	1.60E-22
3	GO:0009507: chloroplast	9.89E-22
4	GO:0009941: chloroplast envelope	2.52E-19
5	GO:0009570: chloroplast stroma	1.48E-07
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.53E-07
7	GO:0009706: chloroplast inner membrane	1.73E-05
8	GO:0009579: thylakoid	1.74E-05
9	GO:0010287: plastoglobule	2.44E-05
10	GO:0009543: chloroplast thylakoid lumen	2.72E-05
11	GO:0009515: granal stacked thylakoid	6.91E-05
12	GO:0031977: thylakoid lumen	1.01E-04
13	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.66E-04
14	GO:0031357: integral component of chloroplast inner membrane	1.66E-04
15	GO:0010007: magnesium chelatase complex	2.81E-04
16	GO:0009544: chloroplast ATP synthase complex	5.42E-04
17	GO:0010319: stromule	6.19E-04
18	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	8.40E-04
19	GO:0031969: chloroplast membrane	1.27E-03
20	GO:0009538: photosystem I reaction center	1.34E-03
21	GO:0030076: light-harvesting complex	3.30E-03
22	GO:0042651: thylakoid membrane	4.08E-03
23	GO:0009522: photosystem I	6.42E-03
24	GO:0016020: membrane	7.30E-03
25	GO:0009707: chloroplast outer membrane	1.10E-02
26	GO:0048046: apoplast	1.55E-02
27	GO:0005623: cell	2.96E-02
28	GO:0005840: ribosome	4.91E-02