Gene: AT5G03940
Gene description
TAIR ID: AT5G03940
Short description: chloroplast signal recognition particle 54 kDa subunit
Pathogen responsiveness: 0.07
General responsiveness: 1.31
GO biological process
SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, protein import into chloroplast thylakoid membrane
GO cellular component
cytoplasm, signal recognition particle, endoplasmic reticulum targeting, chloroplast, chloroplast stroma
GO molecular function
protein binding
Protein domain
| Pfam | PF02881, SRP54-type protein, helical bundle domain |
| Pfam | PF02978, Signal peptide binding domain |
| Pfam | PF00448, SRP54-type protein, GTPase domain |
| SMART | SM00963, SRP54_N |
| SMART | SM00382, AAA |
| SMART | SM00962, SRP54 |
Metabolic pathway
Not involved in metabolic pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
23 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 2 h | -1.87 | 2.90E-03 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -2.09 | 3.07E-04 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -2.34 | 6.72E-05 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -1.59 | 1.31E-03 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.93 | 1.94E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -2.20 | 8.98E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -3.90 | 1.45E-11 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | -2.26 | 8.17E-07 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.76 | 5.99E-03 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.65 | 1.52E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.86 | 3.41E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -2.37 | 8.06E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -2.07 | 6.66E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.84 | 5.32E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.05 | 6.58E-12 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | -1.51 | 1.41E-02 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -2.06 | 1.80E-03 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -2.42 | 3.47E-05 |
| GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | -1.58 | 1.93E-06 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | -1.71 | 2.24E-07 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.73 | 2.42E-03 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -1.79 | 3.20E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -1.76 | 1.80E-02 |
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