Gene: AT5G03650
     

Gene description


TAIR ID: AT5G03650

Short description: starch branching enzyme 2.2

Pathogen responsiveness: -0.41

General responsiveness: 0.37

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G073054  

Wheat:

TA.39.1.S1_A_AT  TA.39.1.S1_X_AT  TA.39.2.S1_AT  


GO biological process


glycogen biosynthetic process, starch metabolic process, starch biosynthetic process, amylopectin biosynthetic process


GO cellular component


chloroplast stroma, amyloplast, chloroplast


GO molecular function


cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis), 1,4-alpha-glucan branching enzyme activity


Protein domain


PfamPF02922, Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
PfamPF00128, Alpha amylase, catalytic domain
PfamPF02806, Alpha amylase, C-terminal all-beta domain
SMARTSM00642, Aamy

Metabolic pathway


PWY-622: starch biosynthesis

Transcriptional regulation


Regulator:
AT2G40220, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.525.16E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.682.92E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.771.41E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.747.53E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.411.06E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.036.29E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.555.69E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.428.70E-15
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.444.31E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.014.40E-04






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