GO Enrichment Analysis of Co-expressed Genes with
AT5G03650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 4 | GO:0010027: thylakoid membrane organization | 1.42E-07 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 5.46E-06 |
| 6 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.07E-06 |
| 7 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.71E-05 |
| 8 | GO:1901259: chloroplast rRNA processing | 5.23E-05 |
| 9 | GO:0071482: cellular response to light stimulus | 1.14E-04 |
| 10 | GO:0043953: protein transport by the Tat complex | 1.35E-04 |
| 11 | GO:0051775: response to redox state | 1.35E-04 |
| 12 | GO:0080051: cutin transport | 1.35E-04 |
| 13 | GO:0065002: intracellular protein transmembrane transport | 1.35E-04 |
| 14 | GO:0010206: photosystem II repair | 1.40E-04 |
| 15 | GO:0000373: Group II intron splicing | 1.40E-04 |
| 16 | GO:0010205: photoinhibition | 1.69E-04 |
| 17 | GO:0005986: sucrose biosynthetic process | 3.08E-04 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.11E-04 |
| 19 | GO:0015908: fatty acid transport | 3.11E-04 |
| 20 | GO:0080005: photosystem stoichiometry adjustment | 3.11E-04 |
| 21 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.11E-04 |
| 22 | GO:0006753: nucleoside phosphate metabolic process | 5.13E-04 |
| 23 | GO:0051604: protein maturation | 5.13E-04 |
| 24 | GO:0016050: vesicle organization | 5.13E-04 |
| 25 | GO:0051016: barbed-end actin filament capping | 7.34E-04 |
| 26 | GO:0006020: inositol metabolic process | 7.34E-04 |
| 27 | GO:0009152: purine ribonucleotide biosynthetic process | 7.34E-04 |
| 28 | GO:0046653: tetrahydrofolate metabolic process | 7.34E-04 |
| 29 | GO:0006107: oxaloacetate metabolic process | 7.34E-04 |
| 30 | GO:0055114: oxidation-reduction process | 7.40E-04 |
| 31 | GO:0015979: photosynthesis | 8.62E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 9.73E-04 |
| 33 | GO:0006021: inositol biosynthetic process | 9.73E-04 |
| 34 | GO:0071483: cellular response to blue light | 9.73E-04 |
| 35 | GO:0006734: NADH metabolic process | 9.73E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 9.73E-04 |
| 37 | GO:0010222: stem vascular tissue pattern formation | 9.73E-04 |
| 38 | GO:0006109: regulation of carbohydrate metabolic process | 9.73E-04 |
| 39 | GO:0019252: starch biosynthetic process | 1.08E-03 |
| 40 | GO:0009247: glycolipid biosynthetic process | 1.23E-03 |
| 41 | GO:0043097: pyrimidine nucleoside salvage | 1.23E-03 |
| 42 | GO:0080110: sporopollenin biosynthetic process | 1.23E-03 |
| 43 | GO:0006206: pyrimidine nucleobase metabolic process | 1.51E-03 |
| 44 | GO:0046855: inositol phosphate dephosphorylation | 1.51E-03 |
| 45 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.51E-03 |
| 46 | GO:0042549: photosystem II stabilization | 1.51E-03 |
| 47 | GO:0042026: protein refolding | 1.81E-03 |
| 48 | GO:0006458: 'de novo' protein folding | 1.81E-03 |
| 49 | GO:0009854: oxidative photosynthetic carbon pathway | 1.81E-03 |
| 50 | GO:0051693: actin filament capping | 2.12E-03 |
| 51 | GO:0010196: nonphotochemical quenching | 2.12E-03 |
| 52 | GO:0015937: coenzyme A biosynthetic process | 2.12E-03 |
| 53 | GO:0009645: response to low light intensity stimulus | 2.12E-03 |
| 54 | GO:0006400: tRNA modification | 2.12E-03 |
| 55 | GO:0009642: response to light intensity | 2.46E-03 |
| 56 | GO:0030091: protein repair | 2.46E-03 |
| 57 | GO:0019375: galactolipid biosynthetic process | 2.46E-03 |
| 58 | GO:0009704: de-etiolation | 2.46E-03 |
| 59 | GO:0048564: photosystem I assembly | 2.46E-03 |
| 60 | GO:0009735: response to cytokinin | 2.63E-03 |
| 61 | GO:0009853: photorespiration | 2.70E-03 |
| 62 | GO:0009658: chloroplast organization | 3.06E-03 |
| 63 | GO:0006098: pentose-phosphate shunt | 3.17E-03 |
| 64 | GO:0006810: transport | 4.35E-03 |
| 65 | GO:0043085: positive regulation of catalytic activity | 4.36E-03 |
| 66 | GO:0006352: DNA-templated transcription, initiation | 4.36E-03 |
| 67 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.36E-03 |
| 68 | GO:0005983: starch catabolic process | 4.79E-03 |
| 69 | GO:0006790: sulfur compound metabolic process | 4.79E-03 |
| 70 | GO:0010588: cotyledon vascular tissue pattern formation | 5.22E-03 |
| 71 | GO:0010628: positive regulation of gene expression | 5.22E-03 |
| 72 | GO:0006108: malate metabolic process | 5.22E-03 |
| 73 | GO:0030036: actin cytoskeleton organization | 5.22E-03 |
| 74 | GO:0006094: gluconeogenesis | 5.22E-03 |
| 75 | GO:0006096: glycolytic process | 5.50E-03 |
| 76 | GO:0010143: cutin biosynthetic process | 5.68E-03 |
| 77 | GO:0019253: reductive pentose-phosphate cycle | 5.68E-03 |
| 78 | GO:0010207: photosystem II assembly | 5.68E-03 |
| 79 | GO:0007015: actin filament organization | 5.68E-03 |
| 80 | GO:0090351: seedling development | 6.14E-03 |
| 81 | GO:0046854: phosphatidylinositol phosphorylation | 6.14E-03 |
| 82 | GO:0032259: methylation | 6.23E-03 |
| 83 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.62E-03 |
| 84 | GO:0061077: chaperone-mediated protein folding | 8.14E-03 |
| 85 | GO:0009269: response to desiccation | 8.14E-03 |
| 86 | GO:0016226: iron-sulfur cluster assembly | 8.67E-03 |
| 87 | GO:0009058: biosynthetic process | 8.74E-03 |
| 88 | GO:0010584: pollen exine formation | 9.77E-03 |
| 89 | GO:0042631: cellular response to water deprivation | 1.09E-02 |
| 90 | GO:0006520: cellular amino acid metabolic process | 1.15E-02 |
| 91 | GO:0006662: glycerol ether metabolic process | 1.15E-02 |
| 92 | GO:0009741: response to brassinosteroid | 1.15E-02 |
| 93 | GO:0048544: recognition of pollen | 1.21E-02 |
| 94 | GO:0006814: sodium ion transport | 1.21E-02 |
| 95 | GO:0009646: response to absence of light | 1.21E-02 |
| 96 | GO:0009791: post-embryonic development | 1.27E-02 |
| 97 | GO:0008654: phospholipid biosynthetic process | 1.27E-02 |
| 98 | GO:0009409: response to cold | 1.39E-02 |
| 99 | GO:0019761: glucosinolate biosynthetic process | 1.40E-02 |
| 100 | GO:0032502: developmental process | 1.40E-02 |
| 101 | GO:0030163: protein catabolic process | 1.46E-02 |
| 102 | GO:0009567: double fertilization forming a zygote and endosperm | 1.53E-02 |
| 103 | GO:0006508: proteolysis | 1.56E-02 |
| 104 | GO:0001666: response to hypoxia | 1.73E-02 |
| 105 | GO:0018298: protein-chromophore linkage | 2.09E-02 |
| 106 | GO:0080167: response to karrikin | 2.21E-02 |
| 107 | GO:0034599: cellular response to oxidative stress | 2.56E-02 |
| 108 | GO:0006099: tricarboxylic acid cycle | 2.56E-02 |
| 109 | GO:0045454: cell redox homeostasis | 2.64E-02 |
| 110 | GO:0009644: response to high light intensity | 3.14E-02 |
| 111 | GO:0006855: drug transmembrane transport | 3.31E-02 |
| 112 | GO:0006364: rRNA processing | 3.67E-02 |
| 113 | GO:0006417: regulation of translation | 3.95E-02 |
| 114 | GO:0043086: negative regulation of catalytic activity | 4.13E-02 |
| 115 | GO:0048316: seed development | 4.23E-02 |
| 116 | GO:0009742: brassinosteroid mediated signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 8 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 9 | GO:0050307: sucrose-phosphate phosphatase activity | 3.44E-06 |
| 10 | GO:0009011: starch synthase activity | 1.51E-05 |
| 11 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.51E-05 |
| 12 | GO:0004176: ATP-dependent peptidase activity | 2.64E-05 |
| 13 | GO:0048038: quinone binding | 8.10E-05 |
| 14 | GO:0050308: sugar-phosphatase activity | 1.35E-04 |
| 15 | GO:0010945: CoA pyrophosphatase activity | 1.35E-04 |
| 16 | GO:0019203: carbohydrate phosphatase activity | 1.35E-04 |
| 17 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.35E-04 |
| 18 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.35E-04 |
| 19 | GO:0015245: fatty acid transporter activity | 1.35E-04 |
| 20 | GO:0035671: enone reductase activity | 1.35E-04 |
| 21 | GO:0016491: oxidoreductase activity | 2.23E-04 |
| 22 | GO:0004222: metalloendopeptidase activity | 2.33E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.11E-04 |
| 24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.11E-04 |
| 25 | GO:0047746: chlorophyllase activity | 3.11E-04 |
| 26 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.11E-04 |
| 27 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 3.11E-04 |
| 28 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.11E-04 |
| 29 | GO:0033201: alpha-1,4-glucan synthase activity | 3.11E-04 |
| 30 | GO:0004373: glycogen (starch) synthase activity | 5.13E-04 |
| 31 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 5.13E-04 |
| 32 | GO:0008864: formyltetrahydrofolate deformylase activity | 5.13E-04 |
| 33 | GO:0035250: UDP-galactosyltransferase activity | 7.34E-04 |
| 34 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 7.34E-04 |
| 35 | GO:0008508: bile acid:sodium symporter activity | 7.34E-04 |
| 36 | GO:0016987: sigma factor activity | 9.73E-04 |
| 37 | GO:0001053: plastid sigma factor activity | 9.73E-04 |
| 38 | GO:0005319: lipid transporter activity | 9.73E-04 |
| 39 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.73E-04 |
| 40 | GO:0008237: metallopeptidase activity | 1.47E-03 |
| 41 | GO:0042578: phosphoric ester hydrolase activity | 1.51E-03 |
| 42 | GO:0000210: NAD+ diphosphatase activity | 1.51E-03 |
| 43 | GO:0016615: malate dehydrogenase activity | 1.51E-03 |
| 44 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.51E-03 |
| 45 | GO:2001070: starch binding | 1.51E-03 |
| 46 | GO:0004332: fructose-bisphosphate aldolase activity | 1.51E-03 |
| 47 | GO:0016168: chlorophyll binding | 1.74E-03 |
| 48 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.81E-03 |
| 49 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.81E-03 |
| 50 | GO:0030060: L-malate dehydrogenase activity | 1.81E-03 |
| 51 | GO:0004849: uridine kinase activity | 1.81E-03 |
| 52 | GO:0016787: hydrolase activity | 2.44E-03 |
| 53 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.46E-03 |
| 54 | GO:0004033: aldo-keto reductase (NADP) activity | 2.46E-03 |
| 55 | GO:0043022: ribosome binding | 2.46E-03 |
| 56 | GO:0008135: translation factor activity, RNA binding | 2.81E-03 |
| 57 | GO:0008168: methyltransferase activity | 2.91E-03 |
| 58 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.17E-03 |
| 59 | GO:0008047: enzyme activator activity | 3.95E-03 |
| 60 | GO:0044183: protein binding involved in protein folding | 4.36E-03 |
| 61 | GO:0008266: poly(U) RNA binding | 5.68E-03 |
| 62 | GO:0031409: pigment binding | 6.62E-03 |
| 63 | GO:0051536: iron-sulfur cluster binding | 7.11E-03 |
| 64 | GO:0004857: enzyme inhibitor activity | 7.11E-03 |
| 65 | GO:0009055: electron carrier activity | 7.20E-03 |
| 66 | GO:0022891: substrate-specific transmembrane transporter activity | 9.21E-03 |
| 67 | GO:0047134: protein-disulfide reductase activity | 1.03E-02 |
| 68 | GO:0050662: coenzyme binding | 1.21E-02 |
| 69 | GO:0004791: thioredoxin-disulfide reductase activity | 1.21E-02 |
| 70 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.46E-02 |
| 71 | GO:0016791: phosphatase activity | 1.53E-02 |
| 72 | GO:0004672: protein kinase activity | 1.57E-02 |
| 73 | GO:0051213: dioxygenase activity | 1.73E-02 |
| 74 | GO:0000287: magnesium ion binding | 1.74E-02 |
| 75 | GO:0016757: transferase activity, transferring glycosyl groups | 1.86E-02 |
| 76 | GO:0008236: serine-type peptidase activity | 2.02E-02 |
| 77 | GO:0050660: flavin adenine dinucleotide binding | 2.06E-02 |
| 78 | GO:0008233: peptidase activity | 2.17E-02 |
| 79 | GO:0015238: drug transmembrane transporter activity | 2.17E-02 |
| 80 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.48E-02 |
| 81 | GO:0003746: translation elongation factor activity | 2.48E-02 |
| 82 | GO:0042803: protein homodimerization activity | 2.77E-02 |
| 83 | GO:0005198: structural molecule activity | 3.23E-02 |
| 84 | GO:0051287: NAD binding | 3.40E-02 |
| 85 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.67E-02 |
| 86 | GO:0045735: nutrient reservoir activity | 4.13E-02 |
| 87 | GO:0016874: ligase activity | 4.52E-02 |
| 88 | GO:0003779: actin binding | 4.62E-02 |
| 89 | GO:0051082: unfolded protein binding | 4.71E-02 |
| 90 | GO:0016746: transferase activity, transferring acyl groups | 4.81E-02 |
| 91 | GO:0015035: protein disulfide oxidoreductase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0043235: receptor complex | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 1.04E-37 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.78E-19 |
| 6 | GO:0009941: chloroplast envelope | 4.50E-15 |
| 7 | GO:0009534: chloroplast thylakoid | 4.70E-15 |
| 8 | GO:0009570: chloroplast stroma | 1.03E-13 |
| 9 | GO:0009579: thylakoid | 8.27E-10 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.72E-08 |
| 11 | GO:0009782: photosystem I antenna complex | 1.35E-04 |
| 12 | GO:0031361: integral component of thylakoid membrane | 1.35E-04 |
| 13 | GO:0008290: F-actin capping protein complex | 3.11E-04 |
| 14 | GO:0009897: external side of plasma membrane | 5.13E-04 |
| 15 | GO:0033281: TAT protein transport complex | 5.13E-04 |
| 16 | GO:0042646: plastid nucleoid | 7.34E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 8.92E-04 |
| 18 | GO:0009517: PSII associated light-harvesting complex II | 9.73E-04 |
| 19 | GO:0009526: plastid envelope | 9.73E-04 |
| 20 | GO:0010287: plastoglobule | 1.10E-03 |
| 21 | GO:0055035: plastid thylakoid membrane | 1.23E-03 |
| 22 | GO:0010319: stromule | 1.47E-03 |
| 23 | GO:0009501: amyloplast | 2.46E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 3.17E-03 |
| 25 | GO:0031977: thylakoid lumen | 3.20E-03 |
| 26 | GO:0009508: plastid chromosome | 5.22E-03 |
| 27 | GO:0030076: light-harvesting complex | 6.14E-03 |
| 28 | GO:0048046: apoplast | 6.89E-03 |
| 29 | GO:0009654: photosystem II oxygen evolving complex | 7.62E-03 |
| 30 | GO:0042651: thylakoid membrane | 7.62E-03 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 8.29E-03 |
| 32 | GO:0009536: plastid | 1.20E-02 |
| 33 | GO:0009523: photosystem II | 1.27E-02 |
| 34 | GO:0019898: extrinsic component of membrane | 1.27E-02 |
| 35 | GO:0009295: nucleoid | 1.60E-02 |
| 36 | GO:0005778: peroxisomal membrane | 1.60E-02 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 1.73E-02 |
| 38 | GO:0016020: membrane | 4.15E-02 |