co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G03650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0034337: RNA folding	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0090470: shoot organ boundary specification	0.00E+00
5	GO:0015995: chlorophyll biosynthetic process	4.25E-10
6	GO:0055114: oxidation-reduction process	4.25E-06
7	GO:0009735: response to cytokinin	5.52E-06
8	GO:0006412: translation	1.24E-05
9	GO:0015979: photosynthesis	4.92E-05
10	GO:0006633: fatty acid biosynthetic process	5.73E-05
11	GO:0009854: oxidative photosynthetic carbon pathway	9.02E-05
12	GO:0048564: photosystem I assembly	1.53E-04
13	GO:0043953: protein transport by the Tat complex	1.91E-04
14	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.91E-04
15	GO:0043489: RNA stabilization	1.91E-04
16	GO:0015671: oxygen transport	1.91E-04
17	GO:1904966: positive regulation of vitamin E biosynthetic process	1.91E-04
18	GO:0032544: plastid translation	1.91E-04
19	GO:0000481: maturation of 5S rRNA	1.91E-04
20	GO:0015801: aromatic amino acid transport	1.91E-04
21	GO:1904964: positive regulation of phytol biosynthetic process	1.91E-04
22	GO:0065002: intracellular protein transmembrane transport	1.91E-04
23	GO:0071482: cellular response to light stimulus	1.91E-04
24	GO:0006783: heme biosynthetic process	2.33E-04
25	GO:0009817: defense response to fungus, incompatible interaction	3.84E-04
26	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.29E-04
27	GO:0006518: peptide metabolic process	6.99E-04
28	GO:0034051: negative regulation of plant-type hypersensitive response	6.99E-04
29	GO:0006065: UDP-glucuronate biosynthetic process	6.99E-04
30	GO:0005977: glycogen metabolic process	6.99E-04
31	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.97E-04
32	GO:0033014: tetrapyrrole biosynthetic process	9.97E-04
33	GO:0010731: protein glutathionylation	9.97E-04
34	GO:2001141: regulation of RNA biosynthetic process	9.97E-04
35	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.97E-04
36	GO:0010371: regulation of gibberellin biosynthetic process	9.97E-04
37	GO:0009658: chloroplast organization	1.05E-03
38	GO:0042254: ribosome biogenesis	1.08E-03
39	GO:0010021: amylopectin biosynthetic process	1.32E-03
40	GO:0006536: glutamate metabolic process	1.32E-03
41	GO:0010600: regulation of auxin biosynthetic process	1.32E-03
42	GO:0043097: pyrimidine nucleoside salvage	1.68E-03
43	GO:0000304: response to singlet oxygen	1.68E-03
44	GO:0006564: L-serine biosynthetic process	1.68E-03
45	GO:0019252: starch biosynthetic process	1.71E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	2.07E-03
47	GO:0006655: phosphatidylglycerol biosynthetic process	2.07E-03
48	GO:0006014: D-ribose metabolic process	2.07E-03
49	GO:0042549: photosystem II stabilization	2.07E-03
50	GO:0000470: maturation of LSU-rRNA	2.07E-03
51	GO:1901259: chloroplast rRNA processing	2.49E-03
52	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.49E-03
53	GO:0010027: thylakoid membrane organization	2.63E-03
54	GO:0006400: tRNA modification	2.93E-03
55	GO:0010161: red light signaling pathway	2.93E-03
56	GO:0009772: photosynthetic electron transport in photosystem II	2.93E-03
57	GO:0009704: de-etiolation	3.40E-03
58	GO:0032508: DNA duplex unwinding	3.40E-03
59	GO:0010928: regulation of auxin mediated signaling pathway	3.40E-03
60	GO:0006526: arginine biosynthetic process	3.88E-03
61	GO:0009853: photorespiration	4.33E-03
62	GO:0019432: triglyceride biosynthetic process	4.40E-03
63	GO:0006754: ATP biosynthetic process	4.40E-03
64	GO:0006779: porphyrin-containing compound biosynthetic process	4.93E-03
65	GO:0006782: protoporphyrinogen IX biosynthetic process	5.48E-03
66	GO:0008285: negative regulation of cell proliferation	6.06E-03
67	GO:0019684: photosynthesis, light reaction	6.06E-03
68	GO:0006352: DNA-templated transcription, initiation	6.06E-03
69	GO:0018119: peptidyl-cysteine S-nitrosylation	6.06E-03
70	GO:0009773: photosynthetic electron transport in photosystem I	6.06E-03
71	GO:0016024: CDP-diacylglycerol biosynthetic process	6.66E-03
72	GO:0006807: nitrogen compound metabolic process	7.28E-03
73	GO:0006094: gluconeogenesis	7.28E-03
74	GO:0009767: photosynthetic electron transport chain	7.28E-03
75	GO:0019253: reductive pentose-phosphate cycle	7.91E-03
76	GO:0010207: photosystem II assembly	7.91E-03
77	GO:0009266: response to temperature stimulus	7.91E-03
78	GO:0006096: glycolytic process	8.88E-03
79	GO:0006636: unsaturated fatty acid biosynthetic process	9.25E-03
80	GO:0019762: glucosinolate catabolic process	9.25E-03
81	GO:0007017: microtubule-based process	1.07E-02
82	GO:0010073: meristem maintenance	1.07E-02
83	GO:0031408: oxylipin biosynthetic process	1.14E-02
84	GO:0003333: amino acid transmembrane transport	1.14E-02
85	GO:0048511: rhythmic process	1.14E-02
86	GO:0010431: seed maturation	1.14E-02
87	GO:0035428: hexose transmembrane transport	1.21E-02
88	GO:0016226: iron-sulfur cluster assembly	1.21E-02
89	GO:0019748: secondary metabolic process	1.21E-02
90	GO:0010017: red or far-red light signaling pathway	1.21E-02
91	GO:0009625: response to insect	1.29E-02
92	GO:0010227: floral organ abscission	1.29E-02
93	GO:0042335: cuticle development	1.53E-02
94	GO:0042744: hydrogen peroxide catabolic process	1.53E-02
95	GO:0042631: cellular response to water deprivation	1.53E-02
96	GO:0006520: cellular amino acid metabolic process	1.62E-02
97	GO:0046323: glucose import	1.62E-02
98	GO:0015986: ATP synthesis coupled proton transport	1.70E-02
99	GO:0000302: response to reactive oxygen species	1.88E-02
100	GO:0010228: vegetative to reproductive phase transition of meristem	1.94E-02
101	GO:0009567: double fertilization forming a zygote and endosperm	2.15E-02
102	GO:0042128: nitrate assimilation	2.64E-02
103	GO:0006950: response to stress	2.74E-02
104	GO:0009409: response to cold	2.85E-02
105	GO:0018298: protein-chromophore linkage	2.95E-02
106	GO:0009631: cold acclimation	3.27E-02
107	GO:0007568: aging	3.27E-02
108	GO:0005975: carbohydrate metabolic process	3.36E-02
109	GO:0006865: amino acid transport	3.38E-02
110	GO:0045087: innate immune response	3.49E-02
111	GO:0016051: carbohydrate biosynthetic process	3.49E-02
112	GO:0034599: cellular response to oxidative stress	3.60E-02
113	GO:0044550: secondary metabolite biosynthetic process	3.87E-02
114	GO:0006631: fatty acid metabolic process	3.94E-02
115	GO:0009640: photomorphogenesis	4.18E-02
116	GO:0009636: response to toxic substance	4.54E-02
117	GO:0006855: drug transmembrane transport	4.66E-02
118	GO:0009664: plant-type cell wall organization	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0008887: glycerate kinase activity	0.00E+00
4	GO:0008974: phosphoribulokinase activity	0.00E+00
5	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
6	GO:0008465: glycerate dehydrogenase activity	0.00E+00
7	GO:0046408: chlorophyll synthetase activity	0.00E+00
8	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
9	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
10	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
11	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
12	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
13	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
14	GO:0019843: rRNA binding	1.33E-10
15	GO:0003735: structural constituent of ribosome	5.81E-07
16	GO:0016851: magnesium chelatase activity	1.47E-05
17	GO:0008266: poly(U) RNA binding	2.39E-05
18	GO:0051287: NAD binding	1.02E-04
19	GO:0016491: oxidoreductase activity	1.73E-04
20	GO:0004325: ferrochelatase activity	1.91E-04
21	GO:0004853: uroporphyrinogen decarboxylase activity	1.91E-04
22	GO:0005344: oxygen transporter activity	1.91E-04
23	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.91E-04
24	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.91E-04
25	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.91E-04
26	GO:0016630: protochlorophyllide reductase activity	4.29E-04
27	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	4.29E-04
28	GO:0019156: isoamylase activity	4.29E-04
29	GO:0042389: omega-3 fatty acid desaturase activity	4.29E-04
30	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.29E-04
31	GO:0009977: proton motive force dependent protein transmembrane transporter activity	4.29E-04
32	GO:0004617: phosphoglycerate dehydrogenase activity	4.29E-04
33	GO:0015173: aromatic amino acid transmembrane transporter activity	4.29E-04
34	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.29E-04
35	GO:0031072: heat shock protein binding	4.93E-04
36	GO:0004751: ribose-5-phosphate isomerase activity	6.99E-04
37	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.99E-04
38	GO:0003979: UDP-glucose 6-dehydrogenase activity	6.99E-04
39	GO:0005528: FK506 binding	7.65E-04
40	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.71E-04
41	GO:0043023: ribosomal large subunit binding	9.97E-04
42	GO:0004351: glutamate decarboxylase activity	9.97E-04
43	GO:0043495: protein anchor	1.32E-03
44	GO:0001053: plastid sigma factor activity	1.32E-03
45	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.32E-03
46	GO:0016987: sigma factor activity	1.32E-03
47	GO:0003959: NADPH dehydrogenase activity	1.68E-03
48	GO:0005275: amine transmembrane transporter activity	1.68E-03
49	GO:0016787: hydrolase activity	1.99E-03
50	GO:0004130: cytochrome-c peroxidase activity	2.07E-03
51	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.07E-03
52	GO:0004556: alpha-amylase activity	2.07E-03
53	GO:0004332: fructose-bisphosphate aldolase activity	2.07E-03
54	GO:0004747: ribokinase activity	2.49E-03
55	GO:0004849: uridine kinase activity	2.49E-03
56	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.49E-03
57	GO:0019899: enzyme binding	2.93E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	3.40E-03
59	GO:0008865: fructokinase activity	3.40E-03
60	GO:0004222: metalloendopeptidase activity	3.77E-03
61	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.88E-03
62	GO:0003746: translation elongation factor activity	4.33E-03
63	GO:0071949: FAD binding	4.40E-03
64	GO:0030955: potassium ion binding	4.93E-03
65	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.93E-03
66	GO:0004743: pyruvate kinase activity	4.93E-03
67	GO:0003723: RNA binding	5.14E-03
68	GO:0030234: enzyme regulator activity	5.48E-03
69	GO:0004601: peroxidase activity	5.61E-03
70	GO:0004565: beta-galactosidase activity	7.28E-03
71	GO:0051536: iron-sulfur cluster binding	9.94E-03
72	GO:0051082: unfolded protein binding	1.07E-02
73	GO:0020037: heme binding	1.14E-02
74	GO:0022891: substrate-specific transmembrane transporter activity	1.29E-02
75	GO:0003756: protein disulfide isomerase activity	1.37E-02
76	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.62E-02
77	GO:0005355: glucose transmembrane transporter activity	1.70E-02
78	GO:0048038: quinone binding	1.88E-02
79	GO:0016887: ATPase activity	2.11E-02
80	GO:0005200: structural constituent of cytoskeleton	2.25E-02
81	GO:0016597: amino acid binding	2.34E-02
82	GO:0016168: chlorophyll binding	2.54E-02
83	GO:0003729: mRNA binding	3.27E-02
84	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.27E-02
85	GO:0005507: copper ion binding	3.88E-02
86	GO:0052689: carboxylic ester hydrolase activity	3.93E-02
87	GO:0004364: glutathione transferase activity	4.06E-02
88	GO:0004185: serine-type carboxypeptidase activity	4.18E-02
89	GO:0051537: 2 iron, 2 sulfur cluster binding	4.41E-02
90	GO:0005198: structural molecule activity	4.54E-02
91	GO:0005525: GTP binding	4.62E-02