Gene: AT5G02250
     


Gene description


TAIR ID: AT5G02250

Short description: Ribonuclease II/R family protein

Pathogen responsiveness: -1.02

General responsiveness: -0.81

Orthologous


Rice:

OS01G0841800  

Maize:

GRMZM2G082260  

Wheat: No orthologous gene

GO biological process


RNA catabolic process, rRNA processing, chloroplast organization, embryo development ending in seed dormancy


GO cellular component


exosome (RNase complex), chloroplast, P-body, mitochondrion


GO molecular function


RNA binding, 3'-5'-exoribonuclease activity, exoribonuclease II activity, ribonuclease activity


Protein domain


PfamPF00773, RNB domain
SMARTSM00955, RNB

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.783.70E-03
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.739.44E-08






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