gene detail

Gene description

TAIR ID: AT4G39230

Short description: NmrA-like negative transcriptional regulator family protein

Pathogen responsiveness: 0.40

General responsiveness: -1.63

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to cadmium ion

GO cellular component

cytoplasm

GO molecular function

phenylcoumaran benzylic ether reductase activity

Protein domain

Pfam	PF05368, NmrA-like family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G13790, AT4G16110, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

26 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.98	6.04E-03
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	1.60	4.60E-02
GSE12856	Col, WT, control	Col, WT, Bg h	2.69	5.42E-10
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.12	1.55E-10
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.20	1.22E-02
GSE17464	Laer, GA+Flg22 0 h	Laer, GA+Flg22 2 h	-1.64	4.12E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.53	1.17E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	1.61	5.77E-03
GSE17464	Laer, control	Laer, Flg22 1 h	2.75	1.12E-06
GSE17464	Laer, control	Laer, Flg22 2 h	2.82	1.81E-06
GSE17464	Penta, control	Penta, Flg22 2 h	2.34	2.14E-05
GSE17464	Penta, control	Penta, Flg22 2 h	2.84	1.41E-06
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.20	2.36E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.68	2.88E-07
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	3.42	1.72E-06
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.67	2.05E-11
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.73	1.28E-11
GSE5615	Col, WT, GST 1 h	Col, WT, GST+NPP1 1 h	1.54	4.64E-04
GSE5615	Col, WT, water 1 h	Col, WT, Flg22 1 h	2.35	2.80E-07
GSE5615	Col, WT, water 1 h	Col, WT, HrpZ 1 h	2.26	5.11E-07
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.72	9.22E-06
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.77	9.52E-10
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	2.30	6.88E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.51	1.30E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	1.87	3.07E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.77	6.28E-04