Gene: AT4G36390
     

Gene description


TAIR ID: AT4G36390

Short description: Methylthiotransferase

Pathogen responsiveness: -1.21

General responsiveness: 0.22

Orthologous


Rice:

OS11G0592800  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


tRNA modification


GO cellular component


chloroplast, cytoplasm


GO molecular function


4 iron, 4 sulfur cluster binding, metal ion binding, transferase activity


Protein domain


PfamPF04055, Radical SAM superfamily
PfamPF00919, Uncharacterized protein family UPF0004
PfamPF01938, TRAM domain
SMARTSM00729, Elp3

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.182.30E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.863.59E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.613.12E-08






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