gene detail

Gene description

TAIR ID: AT4G36220

Short description: ferulic acid 5-hydroxylase 1

Pathogen responsiveness: -0.37

General responsiveness: 1.79

Orthologous

Rice: No orthologous gene

Maize:

AC210173.4_FGT005 GRMZM2G100158

Wheat:

TAAFFX.108591.1.S1_X_AT

GO biological process

phenylpropanoid biosynthetic process, lignin biosynthetic process, response to UV-B, oxidation-reduction process

GO cellular component

endoplasmic reticulum, membrane, integral component of membrane

GO molecular function

heme binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen, monooxygenase activity, iron ion binding, ferulate 5-hydroxylase activity, protein binding

Protein domain

Pfam	PF00067, Cytochrome P450

Metabolic pathway

PWY-5168: ferulate and sinapate biosynthesis
PWY-2181: free phenylpropanoid acid biosynthesis
PWY-361: phenylpropanoid biosynthesis

KEGG pathway

PATH:ath00940: Phenylpropanoid biosynthesis

Transcriptional regulation

Regulator:
AT5G53660, AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.08	1.03E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.70	3.08E-09
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.77	2.54E-09
GSE17464	Laer, control	Laer, PstDC3000 12 h	-2.57	1.06E-14
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.19	2.72E-12
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.74	2.66E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.73	2.42E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-1.53	1.64E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.04	6.30E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.28	1.24E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.81	5.04E-04
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	2.42	4.53E-09
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.51	1.95E-07
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.56	1.73E-04