co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G36220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0009991: response to extracellular stimulus	0.00E+00
3	GO:0007160: cell-matrix adhesion	0.00E+00
4	GO:0046109: uridine biosynthetic process	0.00E+00
5	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.09E-05
6	GO:0034620: cellular response to unfolded protein	6.42E-05
7	GO:0046167: glycerol-3-phosphate biosynthetic process	6.42E-05
8	GO:0035266: meristem growth	6.42E-05
9	GO:0007292: female gamete generation	6.42E-05
10	GO:0006641: triglyceride metabolic process	1.55E-04
11	GO:0007584: response to nutrient	1.55E-04
12	GO:0051788: response to misfolded protein	1.55E-04
13	GO:0051258: protein polymerization	1.55E-04
14	GO:0060919: auxin influx	1.55E-04
15	GO:0030433: ubiquitin-dependent ERAD pathway	2.37E-04
16	GO:0019563: glycerol catabolic process	2.63E-04
17	GO:0060968: regulation of gene silencing	2.63E-04
18	GO:0007165: signal transduction	2.97E-04
19	GO:0001676: long-chain fatty acid metabolic process	3.82E-04
20	GO:0043207: response to external biotic stimulus	3.82E-04
21	GO:0006072: glycerol-3-phosphate metabolic process	3.82E-04
22	GO:0009399: nitrogen fixation	3.82E-04
23	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.82E-04
24	GO:0006635: fatty acid beta-oxidation	4.41E-04
25	GO:0010150: leaf senescence	5.04E-04
26	GO:0010188: response to microbial phytotoxin	5.10E-04
27	GO:0006542: glutamine biosynthetic process	5.10E-04
28	GO:0033320: UDP-D-xylose biosynthetic process	5.10E-04
29	GO:0010107: potassium ion import	5.10E-04
30	GO:0035556: intracellular signal transduction	7.13E-04
31	GO:0005975: carbohydrate metabolic process	7.77E-04
32	GO:0006014: D-ribose metabolic process	7.90E-04
33	GO:0048827: phyllome development	7.90E-04
34	GO:0048232: male gamete generation	7.90E-04
35	GO:0043248: proteasome assembly	7.90E-04
36	GO:0042732: D-xylose metabolic process	7.90E-04
37	GO:0010315: auxin efflux	7.90E-04
38	GO:0045087: innate immune response	1.02E-03
39	GO:0006099: tricarboxylic acid cycle	1.06E-03
40	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.10E-03
41	GO:0080167: response to karrikin	1.13E-03
42	GO:0006468: protein phosphorylation	1.19E-03
43	GO:0006631: fatty acid metabolic process	1.20E-03
44	GO:0006605: protein targeting	1.26E-03
45	GO:0010078: maintenance of root meristem identity	1.26E-03
46	GO:0006102: isocitrate metabolic process	1.26E-03
47	GO:0030968: endoplasmic reticulum unfolded protein response	1.44E-03
48	GO:0006098: pentose-phosphate shunt	1.62E-03
49	GO:0008202: steroid metabolic process	1.81E-03
50	GO:0010018: far-red light signaling pathway	1.81E-03
51	GO:2000280: regulation of root development	1.81E-03
52	GO:0006979: response to oxidative stress	1.91E-03
53	GO:0048364: root development	1.94E-03
54	GO:0048829: root cap development	2.01E-03
55	GO:0007064: mitotic sister chromatid cohesion	2.01E-03
56	GO:0006096: glycolytic process	2.04E-03
57	GO:0072593: reactive oxygen species metabolic process	2.21E-03
58	GO:0030148: sphingolipid biosynthetic process	2.21E-03
59	GO:0010015: root morphogenesis	2.21E-03
60	GO:0009698: phenylpropanoid metabolic process	2.21E-03
61	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	2.64E-03
62	GO:0009887: animal organ morphogenesis	2.87E-03
63	GO:0010540: basipetal auxin transport	2.87E-03
64	GO:0034605: cellular response to heat	2.87E-03
65	GO:0002237: response to molecule of bacterial origin	2.87E-03
66	GO:0009933: meristem structural organization	2.87E-03
67	GO:0090351: seedling development	3.09E-03
68	GO:0009969: xyloglucan biosynthetic process	3.09E-03
69	GO:0009225: nucleotide-sugar metabolic process	3.09E-03
70	GO:0010167: response to nitrate	3.09E-03
71	GO:0042753: positive regulation of circadian rhythm	3.33E-03
72	GO:0046686: response to cadmium ion	3.71E-03
73	GO:0031408: oxylipin biosynthetic process	4.08E-03
74	GO:0010227: floral organ abscission	4.60E-03
75	GO:0070417: cellular response to cold	5.15E-03
76	GO:0010118: stomatal movement	5.43E-03
77	GO:0010154: fruit development	5.72E-03
78	GO:0006885: regulation of pH	5.72E-03
79	GO:0048544: recognition of pollen	6.01E-03
80	GO:0009749: response to glucose	6.31E-03
81	GO:0019252: starch biosynthetic process	6.31E-03
82	GO:0009630: gravitropism	6.92E-03
83	GO:0010583: response to cyclopentenone	6.92E-03
84	GO:0006914: autophagy	7.55E-03
85	GO:0009639: response to red or far red light	7.55E-03
86	GO:0046777: protein autophosphorylation	8.59E-03
87	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	8.88E-03
88	GO:0009414: response to water deprivation	8.99E-03
89	GO:0042128: nitrate assimilation	9.22E-03
90	GO:0006950: response to stress	9.57E-03
91	GO:0030244: cellulose biosynthetic process	1.03E-02
92	GO:0009817: defense response to fungus, incompatible interaction	1.03E-02
93	GO:0006869: lipid transport	1.06E-02
94	GO:0048767: root hair elongation	1.07E-02
95	GO:0010311: lateral root formation	1.07E-02
96	GO:0006499: N-terminal protein myristoylation	1.10E-02
97	GO:0009407: toxin catabolic process	1.10E-02
98	GO:0048527: lateral root development	1.14E-02
99	GO:0009867: jasmonic acid mediated signaling pathway	1.22E-02
100	GO:0009926: auxin polar transport	1.45E-02
101	GO:0051707: response to other organism	1.45E-02
102	GO:0000209: protein polyubiquitination	1.50E-02
103	GO:0009636: response to toxic substance	1.58E-02
104	GO:0009965: leaf morphogenesis	1.58E-02
105	GO:0031347: regulation of defense response	1.66E-02
106	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.66E-02
107	GO:0009734: auxin-activated signaling pathway	1.68E-02
108	GO:0006812: cation transport	1.71E-02
109	GO:0009809: lignin biosynthetic process	1.80E-02
110	GO:0009585: red, far-red light phototransduction	1.80E-02
111	GO:0006813: potassium ion transport	1.80E-02
112	GO:0009738: abscisic acid-activated signaling pathway	2.05E-02
113	GO:0048367: shoot system development	2.07E-02
114	GO:0018105: peptidyl-serine phosphorylation	2.36E-02
115	GO:0009737: response to abscisic acid	2.41E-02
116	GO:0009845: seed germination	2.86E-02
117	GO:0006511: ubiquitin-dependent protein catabolic process	2.87E-02
118	GO:0016310: phosphorylation	2.88E-02
119	GO:0006633: fatty acid biosynthetic process	3.19E-02
120	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.69E-02
121	GO:0009617: response to bacterium	3.86E-02
122	GO:0010468: regulation of gene expression	3.86E-02
123	GO:0042742: defense response to bacterium	4.27E-02
124	GO:0009733: response to auxin	4.78E-02
125	GO:0006970: response to osmotic stress	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0004370: glycerol kinase activity	0.00E+00
2	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	0.00E+00
3	GO:0005524: ATP binding	8.69E-07
4	GO:0036402: proteasome-activating ATPase activity	1.09E-05
5	GO:0016301: kinase activity	5.19E-05
6	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	6.42E-05
7	GO:0008802: betaine-aldehyde dehydrogenase activity	6.42E-05
8	GO:0017025: TBP-class protein binding	1.39E-04
9	GO:0019200: carbohydrate kinase activity	1.55E-04
10	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.55E-04
11	GO:0003958: NADPH-hemoprotein reductase activity	1.55E-04
12	GO:0004750: ribulose-phosphate 3-epimerase activity	1.55E-04
13	GO:0045140: inositol phosphoceramide synthase activity	1.55E-04
14	GO:0004751: ribose-5-phosphate isomerase activity	2.63E-04
15	GO:0004383: guanylate cyclase activity	2.63E-04
16	GO:0016805: dipeptidase activity	2.63E-04
17	GO:0004324: ferredoxin-NADP+ reductase activity	2.63E-04
18	GO:0005047: signal recognition particle binding	2.63E-04
19	GO:0004108: citrate (Si)-synthase activity	3.82E-04
20	GO:0004300: enoyl-CoA hydratase activity	3.82E-04
21	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	3.82E-04
22	GO:0001653: peptide receptor activity	3.82E-04
23	GO:0010328: auxin influx transmembrane transporter activity	5.10E-04
24	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	6.45E-04
25	GO:0004356: glutamate-ammonia ligase activity	6.45E-04
26	GO:0048040: UDP-glucuronate decarboxylase activity	7.90E-04
27	GO:0004029: aldehyde dehydrogenase (NAD) activity	7.90E-04
28	GO:0000287: magnesium ion binding	8.49E-04
29	GO:0070403: NAD+ binding	9.40E-04
30	GO:0102391: decanoate--CoA ligase activity	9.40E-04
31	GO:0004012: phospholipid-translocating ATPase activity	9.40E-04
32	GO:0004747: ribokinase activity	9.40E-04
33	GO:0008143: poly(A) binding	1.10E-03
34	GO:0004467: long-chain fatty acid-CoA ligase activity	1.10E-03
35	GO:0008235: metalloexopeptidase activity	1.10E-03
36	GO:0008865: fructokinase activity	1.26E-03
37	GO:0008142: oxysterol binding	1.44E-03
38	GO:0005267: potassium channel activity	1.44E-03
39	GO:0030955: potassium ion binding	1.81E-03
40	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.81E-03
41	GO:0004743: pyruvate kinase activity	1.81E-03
42	GO:0003924: GTPase activity	1.84E-03
43	GO:0004177: aminopeptidase activity	2.21E-03
44	GO:0008559: xenobiotic-transporting ATPase activity	2.21E-03
45	GO:0010329: auxin efflux transmembrane transporter activity	2.64E-03
46	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.64E-03
47	GO:0031624: ubiquitin conjugating enzyme binding	2.87E-03
48	GO:0016887: ATPase activity	3.19E-03
49	GO:0004672: protein kinase activity	3.39E-03
50	GO:0043130: ubiquitin binding	3.57E-03
51	GO:0051087: chaperone binding	3.82E-03
52	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.33E-03
53	GO:0005451: monovalent cation:proton antiporter activity	5.43E-03
54	GO:0015299: solute:proton antiporter activity	6.01E-03
55	GO:0010181: FMN binding	6.01E-03
56	GO:0004674: protein serine/threonine kinase activity	6.06E-03
57	GO:0005516: calmodulin binding	6.36E-03
58	GO:0015385: sodium:proton antiporter activity	7.24E-03
59	GO:0051213: dioxygenase activity	8.54E-03
60	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.22E-03
61	GO:0004683: calmodulin-dependent protein kinase activity	9.57E-03
62	GO:0004871: signal transducer activity	1.01E-02
63	GO:0003824: catalytic activity	1.04E-02
64	GO:0030145: manganese ion binding	1.14E-02
65	GO:0008422: beta-glucosidase activity	1.29E-02
66	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.29E-02
67	GO:0050661: NADP binding	1.33E-02
68	GO:0004364: glutathione transferase activity	1.41E-02
69	GO:0035091: phosphatidylinositol binding	1.54E-02
70	GO:0051287: NAD binding	1.66E-02
71	GO:0015171: amino acid transmembrane transporter activity	1.93E-02
72	GO:0004650: polygalacturonase activity	2.16E-02
73	GO:0016874: ligase activity	2.21E-02
74	GO:0016746: transferase activity, transferring acyl groups	2.36E-02
75	GO:0016829: lyase activity	2.86E-02
76	GO:0005507: copper ion binding	3.01E-02
77	GO:0005525: GTP binding	3.48E-02
78	GO:0004601: peroxidase activity	4.65E-02
79	GO:0003682: chromatin binding	4.83E-02
80	GO:0043531: ADP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0008305: integrin complex	0.00E+00
3	GO:0031597: cytosolic proteasome complex	1.57E-05
4	GO:0031595: nuclear proteasome complex	2.15E-05
5	GO:0008540: proteasome regulatory particle, base subcomplex	5.55E-05
6	GO:0045254: pyruvate dehydrogenase complex	1.55E-04
7	GO:0005783: endoplasmic reticulum	2.55E-04
8	GO:0005886: plasma membrane	4.02E-04
9	GO:0005777: peroxisome	8.08E-04
10	GO:0005829: cytosol	1.16E-03
11	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.44E-03
12	GO:0010494: cytoplasmic stress granule	1.62E-03
13	GO:0000502: proteasome complex	1.73E-03
14	GO:0090404: pollen tube tip	2.21E-03
15	GO:0005802: trans-Golgi network	6.88E-03
16	GO:0032580: Golgi cisterna membrane	7.55E-03
17	GO:0000151: ubiquitin ligase complex	1.03E-02
18	GO:0009506: plasmodesma	1.16E-02
19	GO:0005774: vacuolar membrane	1.24E-02
20	GO:0031902: late endosome membrane	1.37E-02
21	GO:0005737: cytoplasm	2.09E-02
22	GO:0005834: heterotrimeric G-protein complex	2.12E-02
23	GO:0016021: integral component of membrane	3.11E-02
24	GO:0005759: mitochondrial matrix	3.19E-02
25	GO:0005768: endosome	3.85E-02
26	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02