gene detail

Gene description

TAIR ID: AT4G29610

Short description: Cytidine/deoxycytidylate deaminase family protein

Pathogen responsiveness: -1.41

General responsiveness: -1.91

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

cytidine deamination

GO cellular component

nucleus

GO molecular function

cytidine deaminase activity

Protein domain

Pfam	PF08211, Cytidine and deoxycytidylate deaminase zinc-binding region
Pfam	PF00383, Cytidine and deoxycytidylate deaminase zinc-binding region

Metabolic pathway

PWY-6556: pyrimidine ribonucleosides salvage II
PWY-7199: pyrimidine deoxyribonucleosides salvage
PWY-7196: superpathway of pyrimidine ribonucleosides salvage
PWY-7193: pyrimidine ribonucleosides salvage I
PWY0-163: salvage pathways of pyrimidine ribonucleotides
PWY-7200: superpathway of pyrimidine deoxyribonucleoside salvage

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.29	3.42E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.87	1.57E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.64	4.35E-13