GO Enrichment Analysis of Co-expressed Genes with
AT4G29610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032544: plastid translation | 1.63E-09 |
| 2 | GO:0009932: cell tip growth | 4.53E-05 |
| 3 | GO:0010442: guard cell morphogenesis | 7.39E-05 |
| 4 | GO:0071258: cellular response to gravity | 1.77E-04 |
| 5 | GO:0052541: plant-type cell wall cellulose metabolic process | 1.77E-04 |
| 6 | GO:0042335: cuticle development | 4.00E-04 |
| 7 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.32E-04 |
| 8 | GO:0009247: glycolipid biosynthetic process | 7.29E-04 |
| 9 | GO:0010027: thylakoid membrane organization | 7.56E-04 |
| 10 | GO:0006412: translation | 7.72E-04 |
| 11 | GO:0007035: vacuolar acidification | 8.91E-04 |
| 12 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.06E-03 |
| 13 | GO:0009955: adaxial/abaxial pattern specification | 1.06E-03 |
| 14 | GO:1901259: chloroplast rRNA processing | 1.06E-03 |
| 15 | GO:0048280: vesicle fusion with Golgi apparatus | 1.06E-03 |
| 16 | GO:0009610: response to symbiotic fungus | 1.24E-03 |
| 17 | GO:0050829: defense response to Gram-negative bacterium | 1.24E-03 |
| 18 | GO:0019375: galactolipid biosynthetic process | 1.43E-03 |
| 19 | GO:0006783: heme biosynthetic process | 1.83E-03 |
| 20 | GO:0006896: Golgi to vacuole transport | 2.28E-03 |
| 21 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.28E-03 |
| 22 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 2.28E-03 |
| 23 | GO:0006535: cysteine biosynthetic process from serine | 2.28E-03 |
| 24 | GO:0048765: root hair cell differentiation | 2.51E-03 |
| 25 | GO:0000038: very long-chain fatty acid metabolic process | 2.51E-03 |
| 26 | GO:0006415: translational termination | 2.51E-03 |
| 27 | GO:0009073: aromatic amino acid family biosynthetic process | 2.51E-03 |
| 28 | GO:0043085: positive regulation of catalytic activity | 2.51E-03 |
| 29 | GO:0010207: photosystem II assembly | 3.25E-03 |
| 30 | GO:0010053: root epidermal cell differentiation | 3.51E-03 |
| 31 | GO:0006071: glycerol metabolic process | 3.78E-03 |
| 32 | GO:0006487: protein N-linked glycosylation | 4.06E-03 |
| 33 | GO:0019344: cysteine biosynthetic process | 4.06E-03 |
| 34 | GO:0010026: trichome differentiation | 4.34E-03 |
| 35 | GO:0006633: fatty acid biosynthetic process | 4.61E-03 |
| 36 | GO:0015992: proton transport | 4.63E-03 |
| 37 | GO:0040008: regulation of growth | 4.83E-03 |
| 38 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.23E-03 |
| 39 | GO:0019722: calcium-mediated signaling | 5.54E-03 |
| 40 | GO:0042147: retrograde transport, endosome to Golgi | 5.86E-03 |
| 41 | GO:0008380: RNA splicing | 6.03E-03 |
| 42 | GO:0080022: primary root development | 6.18E-03 |
| 43 | GO:0008033: tRNA processing | 6.18E-03 |
| 44 | GO:0006662: glycerol ether metabolic process | 6.51E-03 |
| 45 | GO:0010305: leaf vascular tissue pattern formation | 6.51E-03 |
| 46 | GO:0006623: protein targeting to vacuole | 7.19E-03 |
| 47 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.53E-03 |
| 48 | GO:0010583: response to cyclopentenone | 7.89E-03 |
| 49 | GO:1901657: glycosyl compound metabolic process | 8.25E-03 |
| 50 | GO:0009860: pollen tube growth | 8.42E-03 |
| 51 | GO:0009828: plant-type cell wall loosening | 8.61E-03 |
| 52 | GO:0009567: double fertilization forming a zygote and endosperm | 8.61E-03 |
| 53 | GO:0007267: cell-cell signaling | 8.98E-03 |
| 54 | GO:0000910: cytokinesis | 9.36E-03 |
| 55 | GO:0015995: chlorophyll biosynthetic process | 1.09E-02 |
| 56 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.09E-02 |
| 57 | GO:0045454: cell redox homeostasis | 1.16E-02 |
| 58 | GO:0000160: phosphorelay signal transduction system | 1.22E-02 |
| 59 | GO:0034599: cellular response to oxidative stress | 1.43E-02 |
| 60 | GO:0006397: mRNA processing | 1.50E-02 |
| 61 | GO:0008643: carbohydrate transport | 1.76E-02 |
| 62 | GO:0009664: plant-type cell wall organization | 1.95E-02 |
| 63 | GO:0009734: auxin-activated signaling pathway | 2.03E-02 |
| 64 | GO:0009736: cytokinin-activated signaling pathway | 2.05E-02 |
| 65 | GO:0046686: response to cadmium ion | 2.07E-02 |
| 66 | GO:0009735: response to cytokinin | 2.33E-02 |
| 67 | GO:0042545: cell wall modification | 2.58E-02 |
| 68 | GO:0051726: regulation of cell cycle | 2.75E-02 |
| 69 | GO:0009742: brassinosteroid mediated signaling pathway | 2.75E-02 |
| 70 | GO:0042744: hydrogen peroxide catabolic process | 3.39E-02 |
| 71 | GO:0055114: oxidation-reduction process | 3.40E-02 |
| 72 | GO:0009790: embryo development | 3.46E-02 |
| 73 | GO:0045490: pectin catabolic process | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.43E-05 |
| 2 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 7.39E-05 |
| 3 | GO:0004853: uroporphyrinogen decarboxylase activity | 7.39E-05 |
| 4 | GO:0009374: biotin binding | 7.39E-05 |
| 5 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.77E-04 |
| 6 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.99E-04 |
| 7 | GO:0019843: rRNA binding | 4.25E-04 |
| 8 | GO:0035250: UDP-galactosyltransferase activity | 4.32E-04 |
| 9 | GO:0016149: translation release factor activity, codon specific | 4.32E-04 |
| 10 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 4.32E-04 |
| 11 | GO:0004045: aminoacyl-tRNA hydrolase activity | 5.75E-04 |
| 12 | GO:0003989: acetyl-CoA carboxylase activity | 7.29E-04 |
| 13 | GO:0004040: amidase activity | 7.29E-04 |
| 14 | GO:0004124: cysteine synthase activity | 1.06E-03 |
| 15 | GO:0051753: mannan synthase activity | 1.06E-03 |
| 16 | GO:0052689: carboxylic ester hydrolase activity | 1.62E-03 |
| 17 | GO:0003735: structural constituent of ribosome | 1.73E-03 |
| 18 | GO:0003747: translation release factor activity | 1.83E-03 |
| 19 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.83E-03 |
| 20 | GO:0008047: enzyme activator activity | 2.28E-03 |
| 21 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.51E-03 |
| 22 | GO:0031072: heat shock protein binding | 3.00E-03 |
| 23 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.78E-03 |
| 24 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.78E-03 |
| 25 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.78E-03 |
| 26 | GO:0005528: FK506 binding | 4.06E-03 |
| 27 | GO:0003964: RNA-directed DNA polymerase activity | 4.63E-03 |
| 28 | GO:0008514: organic anion transmembrane transporter activity | 5.54E-03 |
| 29 | GO:0003756: protein disulfide isomerase activity | 5.54E-03 |
| 30 | GO:0047134: protein-disulfide reductase activity | 5.86E-03 |
| 31 | GO:0008080: N-acetyltransferase activity | 6.51E-03 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 6.84E-03 |
| 33 | GO:0010181: FMN binding | 6.84E-03 |
| 34 | GO:0019901: protein kinase binding | 7.19E-03 |
| 35 | GO:0005507: copper ion binding | 7.54E-03 |
| 36 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.25E-03 |
| 37 | GO:0000156: phosphorelay response regulator activity | 8.25E-03 |
| 38 | GO:0005200: structural constituent of cytoskeleton | 8.98E-03 |
| 39 | GO:0008375: acetylglucosaminyltransferase activity | 1.05E-02 |
| 40 | GO:0102483: scopolin beta-glucosidase activity | 1.09E-02 |
| 41 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.26E-02 |
| 42 | GO:0000149: SNARE binding | 1.48E-02 |
| 43 | GO:0008422: beta-glucosidase activity | 1.48E-02 |
| 44 | GO:0005484: SNAP receptor activity | 1.66E-02 |
| 45 | GO:0016491: oxidoreductase activity | 1.67E-02 |
| 46 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.85E-02 |
| 47 | GO:0045330: aspartyl esterase activity | 2.21E-02 |
| 48 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.37E-02 |
| 49 | GO:0004650: polygalacturonase activity | 2.47E-02 |
| 50 | GO:0030599: pectinesterase activity | 2.53E-02 |
| 51 | GO:0051082: unfolded protein binding | 2.64E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 2.69E-02 |
| 53 | GO:0016740: transferase activity | 3.11E-02 |
| 54 | GO:0030170: pyridoxal phosphate binding | 3.33E-02 |
| 55 | GO:0015144: carbohydrate transmembrane transporter activity | 3.52E-02 |
| 56 | GO:0008565: protein transporter activity | 3.52E-02 |
| 57 | GO:0046910: pectinesterase inhibitor activity | 3.70E-02 |
| 58 | GO:0005351: sugar:proton symporter activity | 3.83E-02 |
| 59 | GO:0008194: UDP-glycosyltransferase activity | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009505: plant-type cell wall | 1.36E-07 |
| 2 | GO:0009507: chloroplast | 2.27E-07 |
| 3 | GO:0009570: chloroplast stroma | 2.49E-07 |
| 4 | GO:0009941: chloroplast envelope | 4.26E-07 |
| 5 | GO:0031225: anchored component of membrane | 4.51E-05 |
| 6 | GO:0048046: apoplast | 6.96E-05 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 7.39E-05 |
| 8 | GO:0046658: anchored component of plasma membrane | 1.01E-04 |
| 9 | GO:0009536: plastid | 1.40E-04 |
| 10 | GO:0009509: chromoplast | 2.99E-04 |
| 11 | GO:0009317: acetyl-CoA carboxylase complex | 2.99E-04 |
| 12 | GO:0005618: cell wall | 4.19E-04 |
| 13 | GO:0042646: plastid nucleoid | 4.32E-04 |
| 14 | GO:0005840: ribosome | 5.68E-04 |
| 15 | GO:0009295: nucleoid | 6.76E-04 |
| 16 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 7.29E-04 |
| 17 | GO:0005576: extracellular region | 7.71E-04 |
| 18 | GO:0016363: nuclear matrix | 1.06E-03 |
| 19 | GO:0012507: ER to Golgi transport vesicle membrane | 1.43E-03 |
| 20 | GO:0005763: mitochondrial small ribosomal subunit | 1.83E-03 |
| 21 | GO:0045298: tubulin complex | 1.83E-03 |
| 22 | GO:0009508: plastid chromosome | 3.00E-03 |
| 23 | GO:0000312: plastid small ribosomal subunit | 3.25E-03 |
| 24 | GO:0009579: thylakoid | 6.04E-03 |
| 25 | GO:0009534: chloroplast thylakoid | 6.12E-03 |
| 26 | GO:0009504: cell plate | 7.19E-03 |
| 27 | GO:0071944: cell periphery | 8.25E-03 |
| 28 | GO:0009535: chloroplast thylakoid membrane | 8.57E-03 |
| 29 | GO:0016020: membrane | 9.45E-03 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 9.74E-03 |
| 31 | GO:0031201: SNARE complex | 1.57E-02 |
| 32 | GO:0031902: late endosome membrane | 1.57E-02 |
| 33 | GO:0031977: thylakoid lumen | 1.57E-02 |
| 34 | GO:0009506: plasmodesma | 1.67E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 2.64E-02 |
| 36 | GO:0005794: Golgi apparatus | 2.96E-02 |
| 37 | GO:0009543: chloroplast thylakoid lumen | 3.10E-02 |
| 38 | GO:0005802: trans-Golgi network | 4.08E-02 |
| 39 | GO:0005622: intracellular | 4.52E-02 |
| 40 | GO:0005768: endosome | 4.63E-02 |
| 41 | GO:0022627: cytosolic small ribosomal subunit | 4.75E-02 |