Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G29610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009773: photosynthetic electron transport in photosystem I3.20E-05
2GO:0006081: cellular aldehyde metabolic process1.52E-04
3GO:0071484: cellular response to light intensity2.25E-04
4GO:0006021: inositol biosynthetic process3.05E-04
5GO:0010117: photoprotection3.89E-04
6GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.78E-04
7GO:0015979: photosynthesis5.04E-04
8GO:0010189: vitamin E biosynthetic process5.70E-04
9GO:1900057: positive regulation of leaf senescence6.66E-04
10GO:0008272: sulfate transport6.66E-04
11GO:0009644: response to high light intensity6.67E-04
12GO:0019827: stem cell population maintenance7.68E-04
13GO:0071482: cellular response to light stimulus8.71E-04
14GO:0009051: pentose-phosphate shunt, oxidative branch9.78E-04
15GO:0010205: photoinhibition1.09E-03
16GO:0006535: cysteine biosynthetic process from serine1.20E-03
17GO:0000038: very long-chain fatty acid metabolic process1.32E-03
18GO:0009698: phenylpropanoid metabolic process1.32E-03
19GO:0006094: gluconeogenesis1.57E-03
20GO:0010143: cutin biosynthetic process1.70E-03
21GO:0006633: fatty acid biosynthetic process1.78E-03
22GO:0010025: wax biosynthetic process1.97E-03
23GO:0006636: unsaturated fatty acid biosynthetic process1.97E-03
24GO:0019344: cysteine biosynthetic process2.12E-03
25GO:0007017: microtubule-based process2.26E-03
26GO:0031408: oxylipin biosynthetic process2.41E-03
27GO:0016998: cell wall macromolecule catabolic process2.41E-03
28GO:0016117: carotenoid biosynthetic process3.03E-03
29GO:0010118: stomatal movement3.20E-03
30GO:0042335: cuticle development3.20E-03
31GO:0048868: pollen tube development3.36E-03
32GO:0019252: starch biosynthetic process3.70E-03
33GO:0008654: phospholipid biosynthetic process3.70E-03
34GO:0080167: response to karrikin3.70E-03
35GO:0051607: defense response to virus4.80E-03
36GO:0006869: lipid transport4.84E-03
37GO:0032259: methylation5.21E-03
38GO:0010411: xyloglucan metabolic process5.58E-03
39GO:0015995: chlorophyll biosynthetic process5.58E-03
40GO:0005975: carbohydrate metabolic process5.79E-03
41GO:0000160: phosphorelay signal transduction system6.19E-03
42GO:0010311: lateral root formation6.19E-03
43GO:0006631: fatty acid metabolic process7.95E-03
44GO:0042542: response to hydrogen peroxide8.18E-03
45GO:0051707: response to other organism8.41E-03
46GO:0042546: cell wall biogenesis8.65E-03
47GO:0009736: cytokinin-activated signaling pathway1.04E-02
48GO:0006857: oligopeptide transport1.09E-02
49GO:0006096: glycolytic process1.17E-02
50GO:0043086: negative regulation of catalytic activity1.17E-02
51GO:0042545: cell wall modification1.30E-02
52GO:0016036: cellular response to phosphate starvation1.86E-02
53GO:0045490: pectin catabolic process1.96E-02
54GO:0009733: response to auxin2.20E-02
55GO:0006970: response to osmotic stress2.82E-02
56GO:0010200: response to chitin3.19E-02
57GO:0044550: secondary metabolite biosynthetic process3.31E-02
58GO:0055114: oxidation-reduction process3.51E-02
59GO:0045454: cell redox homeostasis3.54E-02
60GO:0016042: lipid catabolic process4.03E-02
61GO:0009408: response to heat4.11E-02
RankGO TermAdjusted P value
1GO:0045550: geranylgeranyl reductase activity0.00E+00
2GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
3GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
4GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
5GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
6GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
7GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
8GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity3.50E-05
9GO:0031957: very long-chain fatty acid-CoA ligase activity3.50E-05
10GO:0004565: beta-galactosidase activity4.39E-05
11GO:0050017: L-3-cyanoalanine synthase activity8.78E-05
12GO:0008509: anion transmembrane transporter activity8.78E-05
13GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity8.78E-05
14GO:0004512: inositol-3-phosphate synthase activity8.78E-05
15GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.52E-04
16GO:0004373: glycogen (starch) synthase activity1.52E-04
17GO:0017057: 6-phosphogluconolactonase activity2.25E-04
18GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.25E-04
19GO:0009011: starch synthase activity3.05E-04
20GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.89E-04
21GO:0009922: fatty acid elongase activity3.89E-04
22GO:0004029: aldehyde dehydrogenase (NAD) activity4.78E-04
23GO:0004332: fructose-bisphosphate aldolase activity4.78E-04
24GO:0004124: cysteine synthase activity5.70E-04
25GO:0102391: decanoate--CoA ligase activity5.70E-04
26GO:0004467: long-chain fatty acid-CoA ligase activity6.66E-04
27GO:0015140: malate transmembrane transporter activity6.66E-04
28GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.71E-04
29GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.09E-03
30GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.97E-03
31GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.97E-03
32GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.97E-03
33GO:0003954: NADH dehydrogenase activity2.12E-03
34GO:0042802: identical protein binding2.46E-03
35GO:0008168: methyltransferase activity2.88E-03
36GO:0016762: xyloglucan:xyloglucosyl transferase activity3.88E-03
37GO:0000156: phosphorelay response regulator activity4.24E-03
38GO:0005200: structural constituent of cytoskeleton4.60E-03
39GO:0016798: hydrolase activity, acting on glycosyl bonds5.58E-03
40GO:0008289: lipid binding7.55E-03
41GO:0004185: serine-type carboxypeptidase activity8.41E-03
42GO:0005515: protein binding1.08E-02
43GO:0045330: aspartyl esterase activity1.11E-02
44GO:0030599: pectinesterase activity1.27E-02
45GO:0019825: oxygen binding1.38E-02
46GO:0030170: pyridoxal phosphate binding1.68E-02
47GO:0046910: pectinesterase inhibitor activity1.86E-02
48GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.32E-02
49GO:0016788: hydrolase activity, acting on ester bonds2.71E-02
50GO:0052689: carboxylic ester hydrolase activity3.34E-02
51GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.74E-02
52GO:0003924: GTPase activity4.11E-02
53GO:0009055: electron carrier activity4.32E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid2.35E-05
2GO:0031304: intrinsic component of mitochondrial inner membrane8.78E-05
3GO:0009569: chloroplast starch grain8.78E-05
4GO:0009579: thylakoid2.51E-04
5GO:0009507: chloroplast6.58E-04
6GO:0048046: apoplast8.83E-04
7GO:0008180: COP9 signalosome9.78E-04
8GO:0045298: tubulin complex9.78E-04
9GO:0005618: cell wall1.02E-03
10GO:0009654: photosystem II oxygen evolving complex2.26E-03
11GO:0019898: extrinsic component of membrane3.70E-03
12GO:0031969: chloroplast membrane3.70E-03
13GO:0009505: plant-type cell wall4.55E-03
14GO:0019005: SCF ubiquitin ligase complex5.99E-03
15GO:0005773: vacuole7.13E-03
16GO:0031977: thylakoid lumen7.95E-03
17GO:0009535: chloroplast thylakoid membrane9.49E-03
18GO:0000502: proteasome complex1.04E-02
19GO:0005783: endoplasmic reticulum1.08E-02
20GO:0012505: endomembrane system1.30E-02
21GO:0010287: plastoglobule1.50E-02
22GO:0009543: chloroplast thylakoid lumen1.56E-02
23GO:0009705: plant-type vacuole membrane1.96E-02
24GO:0005874: microtubule3.04E-02
25GO:0016020: membrane3.50E-02
26GO:0005576: extracellular region4.84E-02
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Gene type



Gene DE type