Gene: AT4G28250
     


Gene description


TAIR ID: AT4G28250

Short description: expansin B3

Pathogen responsiveness: -0.40

General responsiveness: 0.07

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G078279  

Wheat:

TAAFFX.78732.1.S1_AT  


GO biological process


cell wall organization, unidimensional cell growth, plant-type cell wall loosening, sexual reproduction, syncytium formation, plant-type cell wall organization


GO cellular component


extracellular region, membrane, plasmodesma, cell wall


GO molecular function


unkown


Protein domain


PfamPF03330, Lytic transglycolase
PfamPF01357, Pollen allergen
SMARTSM00837, DPBB_1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.034.18E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.871.45E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.023.86E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.427.78E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.553.34E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.735.78E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.993.23E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.045.13E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.554.55E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.897.92E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.005.52E-05
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.649.07E-10
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.688.86E-06
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.144.33E-05






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