GO Enrichment Analysis of Co-expressed Genes with
AT4G28250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090506: axillary shoot meristem initiation | 6.55E-05 |
| 2 | GO:0019048: modulation by virus of host morphology or physiology | 9.94E-05 |
| 3 | GO:0031048: chromatin silencing by small RNA | 9.94E-05 |
| 4 | GO:0010088: phloem development | 9.94E-05 |
| 5 | GO:0055070: copper ion homeostasis | 9.94E-05 |
| 6 | GO:0000919: cell plate assembly | 1.37E-04 |
| 7 | GO:0051567: histone H3-K9 methylation | 1.37E-04 |
| 8 | GO:0009956: radial pattern formation | 1.37E-04 |
| 9 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.78E-04 |
| 10 | GO:0016458: gene silencing | 2.22E-04 |
| 11 | GO:0009955: adaxial/abaxial pattern specification | 2.68E-04 |
| 12 | GO:0010067: procambium histogenesis | 2.68E-04 |
| 13 | GO:1901259: chloroplast rRNA processing | 2.68E-04 |
| 14 | GO:0017148: negative regulation of translation | 2.68E-04 |
| 15 | GO:0071669: plant-type cell wall organization or biogenesis | 3.15E-04 |
| 16 | GO:0032544: plastid translation | 4.16E-04 |
| 17 | GO:0015780: nucleotide-sugar transport | 4.68E-04 |
| 18 | GO:0030422: production of siRNA involved in RNA interference | 5.78E-04 |
| 19 | GO:0048829: root cap development | 5.78E-04 |
| 20 | GO:0010015: root morphogenesis | 6.34E-04 |
| 21 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.34E-04 |
| 22 | GO:0010588: cotyledon vascular tissue pattern formation | 7.52E-04 |
| 23 | GO:0009933: meristem structural organization | 8.13E-04 |
| 24 | GO:0010223: secondary shoot formation | 8.13E-04 |
| 25 | GO:0046688: response to copper ion | 8.75E-04 |
| 26 | GO:0006306: DNA methylation | 1.13E-03 |
| 27 | GO:0003333: amino acid transmembrane transport | 1.13E-03 |
| 28 | GO:0030245: cellulose catabolic process | 1.20E-03 |
| 29 | GO:0009411: response to UV | 1.27E-03 |
| 30 | GO:0001944: vasculature development | 1.27E-03 |
| 31 | GO:0010089: xylem development | 1.34E-03 |
| 32 | GO:0045454: cell redox homeostasis | 1.43E-03 |
| 33 | GO:0000271: polysaccharide biosynthetic process | 1.49E-03 |
| 34 | GO:0010087: phloem or xylem histogenesis | 1.49E-03 |
| 35 | GO:0006342: chromatin silencing | 1.56E-03 |
| 36 | GO:0010305: leaf vascular tissue pattern formation | 1.56E-03 |
| 37 | GO:0071554: cell wall organization or biogenesis | 1.80E-03 |
| 38 | GO:0010583: response to cyclopentenone | 1.88E-03 |
| 39 | GO:0051607: defense response to virus | 2.21E-03 |
| 40 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 41 | GO:0009816: defense response to bacterium, incompatible interaction | 2.39E-03 |
| 42 | GO:0015995: chlorophyll biosynthetic process | 2.57E-03 |
| 43 | GO:0030244: cellulose biosynthetic process | 2.75E-03 |
| 44 | GO:0009832: plant-type cell wall biogenesis | 2.84E-03 |
| 45 | GO:0007568: aging | 3.03E-03 |
| 46 | GO:0006865: amino acid transport | 3.13E-03 |
| 47 | GO:0042546: cell wall biogenesis | 3.93E-03 |
| 48 | GO:0008643: carbohydrate transport | 4.04E-03 |
| 49 | GO:0006364: rRNA processing | 4.69E-03 |
| 50 | GO:0006417: regulation of translation | 5.03E-03 |
| 51 | GO:0048367: shoot system development | 5.38E-03 |
| 52 | GO:0009624: response to nematode | 5.98E-03 |
| 53 | GO:0071555: cell wall organization | 6.16E-03 |
| 54 | GO:0009790: embryo development | 7.78E-03 |
| 55 | GO:0046686: response to cadmium ion | 9.59E-03 |
| 56 | GO:0009658: chloroplast organization | 1.19E-02 |
| 57 | GO:0042254: ribosome biogenesis | 1.20E-02 |
| 58 | GO:0006970: response to osmotic stress | 1.25E-02 |
| 59 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.42E-02 |
| 60 | GO:0055114: oxidation-reduction process | 1.68E-02 |
| 61 | GO:0009734: auxin-activated signaling pathway | 2.33E-02 |
| 62 | GO:0009416: response to light stimulus | 2.74E-02 |
| 63 | GO:0051301: cell division | 2.92E-02 |
| 64 | GO:0006412: translation | 3.23E-02 |
| 65 | GO:0009414: response to water deprivation | 4.46E-02 |
| 66 | GO:0042742: defense response to bacterium | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 2 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 3 | GO:0051920: peroxiredoxin activity | 1.29E-06 |
| 4 | GO:0016209: antioxidant activity | 2.45E-06 |
| 5 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.39E-05 |
| 6 | GO:0035197: siRNA binding | 9.94E-05 |
| 7 | GO:0046527: glucosyltransferase activity | 1.37E-04 |
| 8 | GO:0043621: protein self-association | 2.14E-04 |
| 9 | GO:0051753: mannan synthase activity | 2.68E-04 |
| 10 | GO:0019843: rRNA binding | 4.75E-04 |
| 11 | GO:0004521: endoribonuclease activity | 6.93E-04 |
| 12 | GO:0004601: peroxidase activity | 9.79E-04 |
| 13 | GO:0033612: receptor serine/threonine kinase binding | 1.13E-03 |
| 14 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.27E-03 |
| 15 | GO:0008810: cellulase activity | 1.27E-03 |
| 16 | GO:0008514: organic anion transmembrane transporter activity | 1.34E-03 |
| 17 | GO:0005102: receptor binding | 1.41E-03 |
| 18 | GO:0016413: O-acetyltransferase activity | 2.21E-03 |
| 19 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.03E-03 |
| 20 | GO:0015293: symporter activity | 4.15E-03 |
| 21 | GO:0005507: copper ion binding | 4.34E-03 |
| 22 | GO:0015171: amino acid transmembrane transporter activity | 5.03E-03 |
| 23 | GO:0004650: polygalacturonase activity | 5.62E-03 |
| 24 | GO:0016491: oxidoreductase activity | 8.11E-03 |
| 25 | GO:0000287: magnesium ion binding | 1.17E-02 |
| 26 | GO:0003735: structural constituent of ribosome | 1.23E-02 |
| 27 | GO:0003682: chromatin binding | 1.24E-02 |
| 28 | GO:0042803: protein homodimerization activity | 1.62E-02 |
| 29 | GO:0003924: GTPase activity | 1.82E-02 |
| 30 | GO:0009055: electron carrier activity | 1.92E-02 |
| 31 | GO:0030246: carbohydrate binding | 3.39E-02 |
| 32 | GO:0005525: GTP binding | 3.91E-02 |
| 33 | GO:0005215: transporter activity | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 3.05E-05 |
| 2 | GO:0005719: nuclear euchromatin | 9.94E-05 |
| 3 | GO:0009505: plant-type cell wall | 1.21E-04 |
| 4 | GO:0055035: plastid thylakoid membrane | 1.78E-04 |
| 5 | GO:0009570: chloroplast stroma | 2.94E-04 |
| 6 | GO:0009533: chloroplast stromal thylakoid | 3.15E-04 |
| 7 | GO:0009579: thylakoid | 4.12E-04 |
| 8 | GO:0005763: mitochondrial small ribosomal subunit | 4.68E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 4.75E-04 |
| 10 | GO:0015030: Cajal body | 5.23E-04 |
| 11 | GO:0009941: chloroplast envelope | 9.90E-04 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 2.16E-03 |
| 13 | GO:0030529: intracellular ribonucleoprotein complex | 2.30E-03 |
| 14 | GO:0015934: large ribosomal subunit | 3.03E-03 |
| 15 | GO:0031977: thylakoid lumen | 3.63E-03 |
| 16 | GO:0031225: anchored component of membrane | 4.75E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 5.98E-03 |
| 18 | GO:0005840: ribosome | 6.45E-03 |
| 19 | GO:0010287: plastoglobule | 6.73E-03 |
| 20 | GO:0005654: nucleoplasm | 6.86E-03 |
| 21 | GO:0009507: chloroplast | 7.46E-03 |
| 22 | GO:0005615: extracellular space | 9.45E-03 |
| 23 | GO:0046658: anchored component of plasma membrane | 1.06E-02 |
| 24 | GO:0009506: plasmodesma | 2.05E-02 |
| 25 | GO:0048046: apoplast | 2.25E-02 |
| 26 | GO:0005618: cell wall | 2.45E-02 |
| 27 | GO:0022626: cytosolic ribosome | 2.66E-02 |
| 28 | GO:0005794: Golgi apparatus | 3.01E-02 |
| 29 | GO:0005777: peroxisome | 3.03E-02 |
| 30 | GO:0005622: intracellular | 4.13E-02 |