gene detail

Gene description

TAIR ID: AT4G20960

Short description: Cytidine/deoxycytidylate deaminase family protein

Pathogen responsiveness: -1.64

General responsiveness: -0.58

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G320099

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, riboflavin biosynthetic process, RNA modification

GO cellular component

chloroplast, chloroplast stroma

GO molecular function

diaminohydroxyphosphoribosylaminopyrimidine deaminase activity, zinc ion binding, hydrolase activity

Protein domain

Pfam	PF00383, Cytidine and deoxycytidylate deaminase zinc-binding region

Metabolic pathway

RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)

KEGG pathway

PATH:ath00740: Riboflavin metabolism

Transcriptional regulation

Regulator:
AT3G27920, AT1G24260, AT5G41315

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.62	4.86E-08