GO Enrichment Analysis of Co-expressed Genes with
AT4G20960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 2 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 3 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0042793: transcription from plastid promoter | 3.53E-06 |
| 7 | GO:0042325: regulation of phosphorylation | 8.18E-05 |
| 8 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 8.18E-05 |
| 9 | GO:0016556: mRNA modification | 2.11E-04 |
| 10 | GO:0015846: polyamine transport | 2.85E-04 |
| 11 | GO:0044205: 'de novo' UMP biosynthetic process | 2.85E-04 |
| 12 | GO:0016123: xanthophyll biosynthetic process | 3.65E-04 |
| 13 | GO:0009228: thiamine biosynthetic process | 4.48E-04 |
| 14 | GO:0006458: 'de novo' protein folding | 5.36E-04 |
| 15 | GO:0017148: negative regulation of translation | 5.36E-04 |
| 16 | GO:0042026: protein refolding | 5.36E-04 |
| 17 | GO:0015693: magnesium ion transport | 6.27E-04 |
| 18 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 6.27E-04 |
| 19 | GO:0042255: ribosome assembly | 7.22E-04 |
| 20 | GO:0006353: DNA-templated transcription, termination | 7.22E-04 |
| 21 | GO:0009409: response to cold | 7.83E-04 |
| 22 | GO:0032544: plastid translation | 8.20E-04 |
| 23 | GO:0045036: protein targeting to chloroplast | 1.13E-03 |
| 24 | GO:0006949: syncytium formation | 1.13E-03 |
| 25 | GO:2000012: regulation of auxin polar transport | 1.47E-03 |
| 26 | GO:0009116: nucleoside metabolic process | 1.99E-03 |
| 27 | GO:0061077: chaperone-mediated protein folding | 2.26E-03 |
| 28 | GO:0007005: mitochondrion organization | 2.40E-03 |
| 29 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.55E-03 |
| 30 | GO:0009658: chloroplast organization | 2.72E-03 |
| 31 | GO:0016117: carotenoid biosynthetic process | 2.84E-03 |
| 32 | GO:0008033: tRNA processing | 3.00E-03 |
| 33 | GO:0000413: protein peptidyl-prolyl isomerization | 3.00E-03 |
| 34 | GO:0006606: protein import into nucleus | 3.00E-03 |
| 35 | GO:0032502: developmental process | 3.80E-03 |
| 36 | GO:1901657: glycosyl compound metabolic process | 3.97E-03 |
| 37 | GO:0009828: plant-type cell wall loosening | 4.14E-03 |
| 38 | GO:0000910: cytokinesis | 4.49E-03 |
| 39 | GO:0009911: positive regulation of flower development | 4.67E-03 |
| 40 | GO:0006974: cellular response to DNA damage stimulus | 5.04E-03 |
| 41 | GO:0046686: response to cadmium ion | 5.30E-03 |
| 42 | GO:0045087: innate immune response | 6.60E-03 |
| 43 | GO:0009965: leaf morphogenesis | 8.53E-03 |
| 44 | GO:0009793: embryo development ending in seed dormancy | 8.75E-03 |
| 45 | GO:0009664: plant-type cell wall organization | 9.22E-03 |
| 46 | GO:0045893: positive regulation of transcription, DNA-templated | 1.01E-02 |
| 47 | GO:0006457: protein folding | 1.13E-02 |
| 48 | GO:0009620: response to fungus | 1.17E-02 |
| 49 | GO:0009742: brassinosteroid mediated signaling pathway | 1.29E-02 |
| 50 | GO:0042744: hydrogen peroxide catabolic process | 1.60E-02 |
| 51 | GO:0009790: embryo development | 1.62E-02 |
| 52 | GO:0006633: fatty acid biosynthetic process | 1.71E-02 |
| 53 | GO:0016036: cellular response to phosphate starvation | 1.74E-02 |
| 54 | GO:0008380: RNA splicing | 2.07E-02 |
| 55 | GO:0009826: unidimensional cell growth | 2.43E-02 |
| 56 | GO:0005975: carbohydrate metabolic process | 2.70E-02 |
| 57 | GO:0055114: oxidation-reduction process | 2.98E-02 |
| 58 | GO:0007165: signal transduction | 3.70E-02 |
| 59 | GO:0006397: mRNA processing | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0019808: polyamine binding | 0.00E+00 |
| 4 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 5 | GO:0010291: carotene beta-ring hydroxylase activity | 8.18E-05 |
| 6 | GO:0052692: raffinose alpha-galactosidase activity | 1.42E-04 |
| 7 | GO:0004557: alpha-galactosidase activity | 1.42E-04 |
| 8 | GO:0003723: RNA binding | 1.46E-04 |
| 9 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 2.11E-04 |
| 10 | GO:0043023: ribosomal large subunit binding | 2.11E-04 |
| 11 | GO:0003690: double-stranded DNA binding | 7.76E-04 |
| 12 | GO:0044183: protein binding involved in protein folding | 1.24E-03 |
| 13 | GO:0015095: magnesium ion transmembrane transporter activity | 1.47E-03 |
| 14 | GO:0019888: protein phosphatase regulator activity | 1.47E-03 |
| 15 | GO:0009982: pseudouridine synthase activity | 1.47E-03 |
| 16 | GO:0008266: poly(U) RNA binding | 1.60E-03 |
| 17 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.85E-03 |
| 18 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.85E-03 |
| 19 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.85E-03 |
| 20 | GO:0004176: ATP-dependent peptidase activity | 2.26E-03 |
| 21 | GO:0005525: GTP binding | 2.32E-03 |
| 22 | GO:0003727: single-stranded RNA binding | 2.69E-03 |
| 23 | GO:0050660: flavin adenine dinucleotide binding | 3.14E-03 |
| 24 | GO:0008536: Ran GTPase binding | 3.15E-03 |
| 25 | GO:0042803: protein homodimerization activity | 4.20E-03 |
| 26 | GO:0008237: metallopeptidase activity | 4.32E-03 |
| 27 | GO:0102483: scopolin beta-glucosidase activity | 5.22E-03 |
| 28 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.60E-03 |
| 29 | GO:0005096: GTPase activator activity | 5.80E-03 |
| 30 | GO:0004222: metalloendopeptidase activity | 5.99E-03 |
| 31 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.19E-03 |
| 32 | GO:0008422: beta-glucosidase activity | 7.01E-03 |
| 33 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.76E-03 |
| 34 | GO:0051082: unfolded protein binding | 1.24E-02 |
| 35 | GO:0019843: rRNA binding | 1.46E-02 |
| 36 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.48E-02 |
| 37 | GO:0042802: identical protein binding | 2.17E-02 |
| 38 | GO:0016491: oxidoreductase activity | 2.34E-02 |
| 39 | GO:0003682: chromatin binding | 2.60E-02 |
| 40 | GO:0016787: hydrolase activity | 3.81E-02 |
| 41 | GO:0003924: GTPase activity | 3.84E-02 |
| 42 | GO:0004519: endonuclease activity | 4.08E-02 |