Gene: AT4G19700
     

Gene description


TAIR ID: AT4G19700

Short description: SBP (S-ribonuclease binding protein) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


proteasome-mediated ubiquitin-dependent protein catabolic process, negative regulation of cysteine-type endopeptidase activity, response to gibberellin, defense response to fungus, defense response to bacterium, negative regulation of programmed cell death


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity, metal ion binding


Protein domain


PfamPF13920, Zinc finger, C3HC4 type (RING finger)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 43 (Top5%)

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.072.68E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.701.39E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.993.55E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.758.64E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.826.95E-13
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.873.35E-14
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.071.05E-15
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.246.03E-18






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