Gene: AT4G19170
     

Gene description


TAIR ID: AT4G19170

Short description: nine-cis-epoxycarotenoid dioxygenase 4

Pathogen responsiveness: 1.73

General responsiveness: 3.02

GO biological process


oxidation-reduction process


GO cellular component


plastoglobule, chloroplast


GO molecular function


oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, metal ion binding, protein binding


Protein domain


PfamPF03055, Retinal pigment epithelial membrane protein

Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


55 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-2.791.25E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.333.39E-09
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.549.43E-09
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.893.20E-10
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.631.82E-02
GSE17464Laer, controlLaer, Flg22 1 h-2.641.21E-02
GSE17464Laer, controlLaer, Flg22 2 h-3.023.39E-03
GSE17464Penta, controlPenta, Flg22 2 h-3.556.73E-04
GSE17464Penta, controlPenta, Flg22 2 h-3.991.45E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.804.68E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.829.46E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.794.38E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.339.46E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.171.53E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.081.53E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.784.92E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-2.012.67E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-3.152.78E-15
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.314.11E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.785.15E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.991.18E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-5.701.89E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.934.52E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-5.692.08E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.395.12E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-5.107.54E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.031.18E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.521.99E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-2.731.93E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.908.07E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-4.271.14E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.522.28E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.872.10E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-4.191.19E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.371.62E-04
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-3.461.38E-08
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.361.48E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.392.47E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.671.60E-09
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.601.62E-02
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h-1.603.48E-02
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-1.741.12E-02
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.532.83E-02
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.771.31E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.273.53E-04
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.884.11E-03
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.727.28E-06
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.736.65E-03
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.737.23E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.863.67E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-4.114.17E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.241.42E-04
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h-1.833.46E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.302.69E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.581.53E-03






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