Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G19170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030644: cellular chloride ion homeostasis0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
4GO:0015970: guanosine tetraphosphate biosynthetic process0.00E+00
5GO:0010600: regulation of auxin biosynthetic process2.26E-06
6GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.63E-06
7GO:0010928: regulation of auxin mediated signaling pathway1.59E-05
8GO:0007623: circadian rhythm1.64E-05
9GO:0009416: response to light stimulus3.15E-05
10GO:0015812: gamma-aminobutyric acid transport4.45E-05
11GO:0006351: transcription, DNA-templated4.69E-05
12GO:0009644: response to high light intensity5.45E-05
13GO:0009718: anthocyanin-containing compound biosynthetic process6.27E-05
14GO:1902884: positive regulation of response to oxidative stress1.10E-04
15GO:0006883: cellular sodium ion homeostasis1.10E-04
16GO:0050684: regulation of mRNA processing1.10E-04
17GO:0010017: red or far-red light signaling pathway1.44E-04
18GO:1901562: response to paraquat1.89E-04
19GO:1902448: positive regulation of shade avoidance1.89E-04
20GO:0006355: regulation of transcription, DNA-templated2.50E-04
21GO:1901002: positive regulation of response to salt stress3.73E-04
22GO:0030104: water homeostasis3.73E-04
23GO:0010023: proanthocyanidin biosynthetic process3.73E-04
24GO:2000306: positive regulation of photomorphogenesis3.73E-04
25GO:0016123: xanthophyll biosynthetic process4.75E-04
26GO:0045962: positive regulation of development, heterochronic5.82E-04
27GO:0000245: spliceosomal complex assembly6.94E-04
28GO:0044550: secondary metabolite biosynthetic process6.97E-04
29GO:0045892: negative regulation of transcription, DNA-templated8.00E-04
30GO:0009645: response to low light intensity stimulus8.11E-04
31GO:0010161: red light signaling pathway8.11E-04
32GO:0009769: photosynthesis, light harvesting in photosystem II8.11E-04
33GO:0010114: response to red light8.29E-04
34GO:0009704: de-etiolation9.32E-04
35GO:0010099: regulation of photomorphogenesis1.06E-03
36GO:0009827: plant-type cell wall modification1.06E-03
37GO:0009585: red, far-red light phototransduction1.10E-03
38GO:0090333: regulation of stomatal closure1.19E-03
39GO:0008356: asymmetric cell division1.32E-03
40GO:0009651: response to salt stress1.32E-03
41GO:0048354: mucilage biosynthetic process involved in seed coat development1.32E-03
42GO:0055062: phosphate ion homeostasis1.47E-03
43GO:0006535: cysteine biosynthetic process from serine1.47E-03
44GO:0009688: abscisic acid biosynthetic process1.47E-03
45GO:0009641: shade avoidance1.47E-03
46GO:0009970: cellular response to sulfate starvation1.47E-03
47GO:0046856: phosphatidylinositol dephosphorylation1.61E-03
48GO:0050826: response to freezing1.92E-03
49GO:0018107: peptidyl-threonine phosphorylation1.92E-03
50GO:0009266: response to temperature stimulus2.09E-03
51GO:0035556: intracellular signal transduction2.22E-03
52GO:0090351: seedling development2.25E-03
53GO:0042023: DNA endoreduplication2.42E-03
54GO:0019344: cysteine biosynthetic process2.60E-03
55GO:0010150: leaf senescence2.63E-03
56GO:0009768: photosynthesis, light harvesting in photosystem I2.77E-03
57GO:0009737: response to abscisic acid2.87E-03
58GO:0003333: amino acid transmembrane transport2.96E-03
59GO:0048511: rhythmic process2.96E-03
60GO:0010431: seed maturation2.96E-03
61GO:0009269: response to desiccation2.96E-03
62GO:0009693: ethylene biosynthetic process3.33E-03
63GO:0071215: cellular response to abscisic acid stimulus3.33E-03
64GO:0010089: xylem development3.53E-03
65GO:0010182: sugar mediated signaling pathway4.14E-03
66GO:0006814: sodium ion transport4.35E-03
67GO:0009723: response to ethylene4.67E-03
68GO:0000302: response to reactive oxygen species4.77E-03
69GO:0016032: viral process4.99E-03
70GO:0010286: heat acclimation5.68E-03
71GO:0015979: photosynthesis5.71E-03
72GO:0048573: photoperiodism, flowering6.89E-03
73GO:0015995: chlorophyll biosynthetic process6.89E-03
74GO:0006629: lipid metabolic process7.38E-03
75GO:0009408: response to heat7.38E-03
76GO:0018298: protein-chromophore linkage7.39E-03
77GO:0009409: response to cold7.42E-03
78GO:0000160: phosphorelay signal transduction system7.65E-03
79GO:0010218: response to far red light7.91E-03
80GO:0009753: response to jasmonic acid7.91E-03
81GO:0006865: amino acid transport8.44E-03
82GO:0009637: response to blue light8.71E-03
83GO:0042542: response to hydrogen peroxide1.01E-02
84GO:0009640: photomorphogenesis1.04E-02
85GO:0008643: carbohydrate transport1.10E-02
86GO:0009965: leaf morphogenesis1.13E-02
87GO:0042538: hyperosmotic salinity response1.22E-02
88GO:0009611: response to wounding1.34E-02
89GO:0006857: oligopeptide transport1.35E-02
90GO:0009909: regulation of flower development1.38E-02
91GO:0009624: response to nematode1.65E-02
92GO:0055085: transmembrane transport1.67E-02
93GO:0018105: peptidyl-serine phosphorylation1.68E-02
94GO:0000398: mRNA splicing, via spliceosome1.83E-02
95GO:0055114: oxidation-reduction process2.25E-02
96GO:0010228: vegetative to reproductive phase transition of meristem2.51E-02
97GO:0009414: response to water deprivation2.60E-02
98GO:0009739: response to gibberellin2.63E-02
99GO:0010468: regulation of gene expression2.76E-02
100GO:0009658: chloroplast organization3.32E-02
101GO:0006970: response to osmotic stress3.50E-02
102GO:0048366: leaf development3.73E-02
103GO:0080167: response to karrikin3.87E-02
104GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.96E-02
105GO:0046686: response to cadmium ion4.14E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
3GO:0015185: gamma-aminobutyric acid transmembrane transporter activity4.45E-05
4GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding4.45E-05
5GO:0030371: translation repressor activity4.45E-05
6GO:0008728: GTP diphosphokinase activity1.10E-04
7GO:0015180: L-alanine transmembrane transporter activity1.10E-04
8GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding1.10E-04
9GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.82E-04
10GO:0009001: serine O-acetyltransferase activity2.78E-04
11GO:0015189: L-lysine transmembrane transporter activity2.78E-04
12GO:0015181: arginine transmembrane transporter activity2.78E-04
13GO:0005313: L-glutamate transmembrane transporter activity3.73E-04
14GO:0003700: transcription factor activity, sequence-specific DNA binding5.23E-04
15GO:0004497: monooxygenase activity6.28E-04
16GO:0003677: DNA binding8.34E-04
17GO:0000989: transcription factor activity, transcription factor binding1.19E-03
18GO:0071949: FAD binding1.19E-03
19GO:0015171: amino acid transmembrane transporter activity1.21E-03
20GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.47E-03
21GO:0047372: acylglycerol lipase activity1.61E-03
22GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.77E-03
23GO:0004022: alcohol dehydrogenase (NAD) activity1.92E-03
24GO:0005315: inorganic phosphate transmembrane transporter activity1.92E-03
25GO:0004565: beta-galactosidase activity1.92E-03
26GO:0003712: transcription cofactor activity2.25E-03
27GO:0031409: pigment binding2.42E-03
28GO:0005351: sugar:proton symporter activity2.57E-03
29GO:0004707: MAP kinase activity2.96E-03
30GO:0019825: oxygen binding3.24E-03
31GO:0008514: organic anion transmembrane transporter activity3.53E-03
32GO:0005506: iron ion binding4.95E-03
33GO:0000156: phosphorelay response regulator activity5.22E-03
34GO:0008270: zinc ion binding5.38E-03
35GO:0005215: transporter activity5.74E-03
36GO:0016168: chlorophyll binding6.39E-03
37GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen6.46E-03
38GO:0020037: heme binding9.02E-03
39GO:0015293: symporter activity1.13E-02
40GO:0045735: nutrient reservoir activity1.45E-02
41GO:0016874: ligase activity1.58E-02
42GO:0015144: carbohydrate transmembrane transporter activity2.20E-02
43GO:0015297: antiporter activity2.35E-02
44GO:0046983: protein dimerization activity3.55E-02
45GO:0004674: protein serine/threonine kinase activity3.77E-02
46GO:0004672: protein kinase activity3.90E-02
RankGO TermAdjusted P value
1GO:0009898: cytoplasmic side of plasma membrane3.73E-04
2GO:0009517: PSII associated light-harvesting complex II3.73E-04
3GO:0030076: light-harvesting complex2.25E-03
4GO:0009941: chloroplast envelope2.39E-03
5GO:0009535: chloroplast thylakoid membrane3.09E-03
6GO:0009522: photosystem I4.35E-03
7GO:0009523: photosystem II4.56E-03
8GO:0031969: chloroplast membrane5.00E-03
9GO:0016021: integral component of membrane9.22E-03
10GO:0016020: membrane1.02E-02
11GO:0031966: mitochondrial membrane1.22E-02
12GO:0016607: nuclear speck1.48E-02
13GO:0009579: thylakoid1.57E-02
14GO:0009706: chloroplast inner membrane1.65E-02
15GO:0010287: plastoglobule1.86E-02
16GO:0009507: chloroplast2.42E-02
17GO:0005774: vacuolar membrane2.44E-02
18GO:0005773: vacuole4.14E-02
19GO:0005634: nucleus4.56E-02
<
Gene type



Gene DE type