GO Enrichment Analysis of Co-expressed Genes with
AT4G18740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 2 | GO:0009773: photosynthetic electron transport in photosystem I | 2.49E-07 |
| 3 | GO:0018298: protein-chromophore linkage | 1.44E-05 |
| 4 | GO:0071482: cellular response to light stimulus | 1.49E-05 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.64E-05 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 3.64E-05 |
| 7 | GO:0051775: response to redox state | 3.64E-05 |
| 8 | GO:0010115: regulation of abscisic acid biosynthetic process | 9.09E-05 |
| 9 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 9.09E-05 |
| 10 | GO:0006954: inflammatory response | 1.58E-04 |
| 11 | GO:0006107: oxaloacetate metabolic process | 2.33E-04 |
| 12 | GO:0080170: hydrogen peroxide transmembrane transport | 2.33E-04 |
| 13 | GO:0006734: NADH metabolic process | 3.14E-04 |
| 14 | GO:0009765: photosynthesis, light harvesting | 3.14E-04 |
| 15 | GO:0006564: L-serine biosynthetic process | 4.01E-04 |
| 16 | GO:0016120: carotene biosynthetic process | 4.01E-04 |
| 17 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 4.92E-04 |
| 18 | GO:0006561: proline biosynthetic process | 4.92E-04 |
| 19 | GO:0015979: photosynthesis | 5.34E-04 |
| 20 | GO:0009854: oxidative photosynthetic carbon pathway | 5.88E-04 |
| 21 | GO:0009645: response to low light intensity stimulus | 6.87E-04 |
| 22 | GO:0010196: nonphotochemical quenching | 6.87E-04 |
| 23 | GO:0009644: response to high light intensity | 6.98E-04 |
| 24 | GO:0009850: auxin metabolic process | 7.90E-04 |
| 25 | GO:0009231: riboflavin biosynthetic process | 7.90E-04 |
| 26 | GO:0009642: response to light intensity | 7.90E-04 |
| 27 | GO:0009664: plant-type cell wall organization | 8.04E-04 |
| 28 | GO:0009638: phototropism | 1.12E-03 |
| 29 | GO:0009688: abscisic acid biosynthetic process | 1.24E-03 |
| 30 | GO:0009750: response to fructose | 1.36E-03 |
| 31 | GO:0010628: positive regulation of gene expression | 1.62E-03 |
| 32 | GO:0006108: malate metabolic process | 1.62E-03 |
| 33 | GO:0055085: transmembrane transport | 2.01E-03 |
| 34 | GO:0007623: circadian rhythm | 2.04E-03 |
| 35 | GO:0006833: water transport | 2.04E-03 |
| 36 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.33E-03 |
| 37 | GO:0034220: ion transmembrane transport | 3.30E-03 |
| 38 | GO:0042631: cellular response to water deprivation | 3.30E-03 |
| 39 | GO:0006520: cellular amino acid metabolic process | 3.47E-03 |
| 40 | GO:0010182: sugar mediated signaling pathway | 3.47E-03 |
| 41 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.00E-03 |
| 42 | GO:0071554: cell wall organization or biogenesis | 4.00E-03 |
| 43 | GO:0007264: small GTPase mediated signal transduction | 4.19E-03 |
| 44 | GO:0010027: thylakoid membrane organization | 5.15E-03 |
| 45 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 5.35E-03 |
| 46 | GO:0010411: xyloglucan metabolic process | 5.76E-03 |
| 47 | GO:0006810: transport | 5.90E-03 |
| 48 | GO:0030244: cellulose biosynthetic process | 6.18E-03 |
| 49 | GO:0000160: phosphorelay signal transduction system | 6.39E-03 |
| 50 | GO:0009853: photorespiration | 7.28E-03 |
| 51 | GO:0006099: tricarboxylic acid cycle | 7.51E-03 |
| 52 | GO:0051707: response to other organism | 8.68E-03 |
| 53 | GO:0009736: cytokinin-activated signaling pathway | 1.07E-02 |
| 54 | GO:0009585: red, far-red light phototransduction | 1.07E-02 |
| 55 | GO:0006096: glycolytic process | 1.20E-02 |
| 56 | GO:0009414: response to water deprivation | 2.00E-02 |
| 57 | GO:0009826: unidimensional cell growth | 2.69E-02 |
| 58 | GO:0048366: leaf development | 3.10E-02 |
| 59 | GO:0005975: carbohydrate metabolic process | 3.12E-02 |
| 60 | GO:0080167: response to karrikin | 3.22E-02 |
| 61 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 62 | GO:0055114: oxidation-reduction process | 3.79E-02 |
| 63 | GO:0032259: methylation | 4.12E-02 |
| 64 | GO:0006629: lipid metabolic process | 4.25E-02 |
| 65 | GO:0009408: response to heat | 4.25E-02 |
| 66 | GO:0009737: response to abscisic acid | 4.36E-02 |
| 67 | GO:0008152: metabolic process | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 6 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 7 | GO:0016168: chlorophyll binding | 1.01E-05 |
| 8 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 3.64E-05 |
| 9 | GO:0008746: NAD(P)+ transhydrogenase activity | 3.64E-05 |
| 10 | GO:0004328: formamidase activity | 3.64E-05 |
| 11 | GO:0008252: nucleotidase activity | 3.64E-05 |
| 12 | GO:0019903: protein phosphatase binding | 9.09E-05 |
| 13 | GO:0004617: phosphoglycerate dehydrogenase activity | 9.09E-05 |
| 14 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 9.09E-05 |
| 15 | GO:0008967: phosphoglycolate phosphatase activity | 9.09E-05 |
| 16 | GO:0022891: substrate-specific transmembrane transporter activity | 1.20E-04 |
| 17 | GO:0003935: GTP cyclohydrolase II activity | 1.58E-04 |
| 18 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.33E-04 |
| 19 | GO:0016413: O-acetyltransferase activity | 2.91E-04 |
| 20 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 3.14E-04 |
| 21 | GO:0043495: protein anchor | 3.14E-04 |
| 22 | GO:0016615: malate dehydrogenase activity | 4.92E-04 |
| 23 | GO:0030060: L-malate dehydrogenase activity | 5.88E-04 |
| 24 | GO:0019899: enzyme binding | 6.87E-04 |
| 25 | GO:0051287: NAD binding | 7.77E-04 |
| 26 | GO:0008081: phosphoric diester hydrolase activity | 1.62E-03 |
| 27 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.62E-03 |
| 28 | GO:0008266: poly(U) RNA binding | 1.76E-03 |
| 29 | GO:0031409: pigment binding | 2.04E-03 |
| 30 | GO:0019901: protein kinase binding | 3.82E-03 |
| 31 | GO:0000156: phosphorelay response regulator activity | 4.37E-03 |
| 32 | GO:0016597: amino acid binding | 4.95E-03 |
| 33 | GO:0015250: water channel activity | 5.15E-03 |
| 34 | GO:0004721: phosphoprotein phosphatase activity | 5.76E-03 |
| 35 | GO:0003993: acid phosphatase activity | 7.51E-03 |
| 36 | GO:0031625: ubiquitin protein ligase binding | 1.15E-02 |
| 37 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.29E-02 |
| 38 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.29E-02 |
| 39 | GO:0022857: transmembrane transporter activity | 1.32E-02 |
| 40 | GO:0030246: carbohydrate binding | 1.36E-02 |
| 41 | GO:0016758: transferase activity, transferring hexosyl groups | 1.58E-02 |
| 42 | GO:0005525: GTP binding | 1.67E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 1.73E-02 |
| 44 | GO:0008194: UDP-glycosyltransferase activity | 2.19E-02 |
| 45 | GO:0042802: identical protein binding | 2.40E-02 |
| 46 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 47 | GO:0016491: oxidoreductase activity | 2.70E-02 |
| 48 | GO:0042803: protein homodimerization activity | 3.78E-02 |
| 49 | GO:0003924: GTPase activity | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.77E-10 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.48E-08 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.88E-05 |
| 4 | GO:0009782: photosystem I antenna complex | 3.64E-05 |
| 5 | GO:0042651: thylakoid membrane | 8.79E-05 |
| 6 | GO:0009523: photosystem II | 1.97E-04 |
| 7 | GO:0009531: secondary cell wall | 2.33E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 2.76E-04 |
| 9 | GO:0009570: chloroplast stroma | 6.57E-04 |
| 10 | GO:0009579: thylakoid | 1.87E-03 |
| 11 | GO:0030076: light-harvesting complex | 1.89E-03 |
| 12 | GO:0005856: cytoskeleton | 9.42E-03 |
| 13 | GO:0016021: integral component of membrane | 1.45E-02 |
| 14 | GO:0010287: plastoglobule | 1.55E-02 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 16 | GO:0048046: apoplast | 1.86E-02 |
| 17 | GO:0009941: chloroplast envelope | 2.57E-02 |
| 18 | GO:0005773: vacuole | 2.99E-02 |
| 19 | GO:0031969: chloroplast membrane | 3.22E-02 |
| 20 | GO:0016020: membrane | 3.82E-02 |
| 21 | GO:0043231: intracellular membrane-bounded organelle | 4.55E-02 |