gene detail

Gene description

TAIR ID: AT4G16990

Short description: disease resistance protein (TIR-NBS class), putative

Pathogen responsiveness: -1.40

General responsiveness: 2.57

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of defense response by callose deposition, defense response to fungus, incompatible interaction, signal transduction, defense response

GO cellular component

cytoplasm, nucleus

GO molecular function

ATP binding, ADP binding

Protein domain

Pfam	PF00931, NB-ARC domain
Pfam	PF01582, TIR domain
Pfam	PF08381, Transcription factor regulating root and shoot growth via Pin3
SMART	SM00255, TIR

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.62	8.77E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.85	5.27E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.09	1.04E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.80	1.57E-14
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.58	2.71E-11