Gene: AT4G09040
     


Gene description


TAIR ID: AT4G09040

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G023591  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


chloroplast stroma, nucleus, chloroplast


GO molecular function


unkown


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.653.34E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.317.03E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.933.33E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.768.40E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.911.22E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.093.83E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.211.28E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.571.85E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.431.06E-11
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.536.95E-11
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.741.03E-12
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.666.03E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.728.24E-13
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.751.40E-12






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