GO Enrichment Analysis of Co-expressed Genes with
AT4G09040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 2 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0033206: meiotic cytokinesis | 2.53E-05 |
| 5 | GO:0009168: purine ribonucleoside monophosphate biosynthetic process | 2.53E-05 |
| 6 | GO:0043971: histone H3-K18 acetylation | 2.53E-05 |
| 7 | GO:0010102: lateral root morphogenesis | 2.69E-05 |
| 8 | GO:0010424: DNA methylation on cytosine within a CG sequence | 6.44E-05 |
| 9 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 6.44E-05 |
| 10 | GO:0032776: DNA methylation on cytosine | 1.13E-04 |
| 11 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.69E-04 |
| 12 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 1.69E-04 |
| 13 | GO:0006166: purine ribonucleoside salvage | 1.69E-04 |
| 14 | GO:0006168: adenine salvage | 1.69E-04 |
| 15 | GO:1900864: mitochondrial RNA modification | 2.30E-04 |
| 16 | GO:0044209: AMP salvage | 2.95E-04 |
| 17 | GO:0042176: regulation of protein catabolic process | 3.65E-04 |
| 18 | GO:1901371: regulation of leaf morphogenesis | 3.65E-04 |
| 19 | GO:0035435: phosphate ion transmembrane transport | 3.65E-04 |
| 20 | GO:1901001: negative regulation of response to salt stress | 4.36E-04 |
| 21 | GO:2000033: regulation of seed dormancy process | 4.36E-04 |
| 22 | GO:1901259: chloroplast rRNA processing | 4.36E-04 |
| 23 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.89E-04 |
| 24 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 5.89E-04 |
| 25 | GO:0044030: regulation of DNA methylation | 6.69E-04 |
| 26 | GO:0010216: maintenance of DNA methylation | 1.01E-03 |
| 27 | GO:0080188: RNA-directed DNA methylation | 1.40E-03 |
| 28 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.61E-03 |
| 29 | GO:0000027: ribosomal large subunit assembly | 1.61E-03 |
| 30 | GO:0009863: salicylic acid mediated signaling pathway | 1.61E-03 |
| 31 | GO:0010187: negative regulation of seed germination | 1.61E-03 |
| 32 | GO:0010501: RNA secondary structure unwinding | 2.42E-03 |
| 33 | GO:0046323: glucose import | 2.55E-03 |
| 34 | GO:0006281: DNA repair | 3.61E-03 |
| 35 | GO:0010029: regulation of seed germination | 3.91E-03 |
| 36 | GO:0010218: response to far red light | 4.83E-03 |
| 37 | GO:0006355: regulation of transcription, DNA-templated | 4.99E-03 |
| 38 | GO:0009867: jasmonic acid mediated signaling pathway | 5.31E-03 |
| 39 | GO:0042538: hyperosmotic salinity response | 7.40E-03 |
| 40 | GO:0051603: proteolysis involved in cellular protein catabolic process | 7.97E-03 |
| 41 | GO:0009651: response to salt stress | 9.33E-03 |
| 42 | GO:0016569: covalent chromatin modification | 9.54E-03 |
| 43 | GO:0009740: gibberellic acid mediated signaling pathway | 9.54E-03 |
| 44 | GO:0009414: response to water deprivation | 1.26E-02 |
| 45 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.51E-02 |
| 46 | GO:0009739: response to gibberellin | 1.58E-02 |
| 47 | GO:0006412: translation | 1.63E-02 |
| 48 | GO:0010468: regulation of gene expression | 1.66E-02 |
| 49 | GO:0009658: chloroplast organization | 1.99E-02 |
| 50 | GO:0042254: ribosome biogenesis | 2.02E-02 |
| 51 | GO:0006970: response to osmotic stress | 2.10E-02 |
| 52 | GO:0009723: response to ethylene | 2.21E-02 |
| 53 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.38E-02 |
| 54 | GO:0007275: multicellular organism development | 2.55E-02 |
| 55 | GO:0009751: response to salicylic acid | 3.04E-02 |
| 56 | GO:0009873: ethylene-activated signaling pathway | 3.68E-02 |
| 57 | GO:0006508: proteolysis | 3.97E-02 |
| 58 | GO:0009735: response to cytokinin | 4.33E-02 |
| 59 | GO:0009738: abscisic acid-activated signaling pathway | 4.51E-02 |
| 60 | GO:0006351: transcription, DNA-templated | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019239: deaminase activity | 2.53E-05 |
| 2 | GO:0010429: methyl-CpNpN binding | 1.13E-04 |
| 3 | GO:0070180: large ribosomal subunit rRNA binding | 1.13E-04 |
| 4 | GO:0010428: methyl-CpNpG binding | 1.13E-04 |
| 5 | GO:0005354: galactose transmembrane transporter activity | 1.69E-04 |
| 6 | GO:0003999: adenine phosphoribosyltransferase activity | 1.69E-04 |
| 7 | GO:0010385: double-stranded methylated DNA binding | 2.30E-04 |
| 8 | GO:0003697: single-stranded DNA binding | 3.23E-04 |
| 9 | GO:0000989: transcription factor activity, transcription factor binding | 7.52E-04 |
| 10 | GO:0008327: methyl-CpG binding | 1.01E-03 |
| 11 | GO:0015114: phosphate ion transmembrane transporter activity | 1.20E-03 |
| 12 | GO:0004402: histone acetyltransferase activity | 2.42E-03 |
| 13 | GO:0008080: N-acetyltransferase activity | 2.55E-03 |
| 14 | GO:0005355: glucose transmembrane transporter activity | 2.68E-03 |
| 15 | GO:0004197: cysteine-type endopeptidase activity | 3.07E-03 |
| 16 | GO:0004518: nuclease activity | 3.07E-03 |
| 17 | GO:0004004: ATP-dependent RNA helicase activity | 4.21E-03 |
| 18 | GO:0008236: serine-type peptidase activity | 4.36E-03 |
| 19 | GO:0003735: structural constituent of ribosome | 4.81E-03 |
| 20 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 5.64E-03 |
| 21 | GO:0042393: histone binding | 5.81E-03 |
| 22 | GO:0004185: serine-type carboxypeptidase activity | 6.32E-03 |
| 23 | GO:0003677: DNA binding | 7.68E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 7.97E-03 |
| 25 | GO:0008234: cysteine-type peptidase activity | 8.35E-03 |
| 26 | GO:0008026: ATP-dependent helicase activity | 1.04E-02 |
| 27 | GO:0015144: carbohydrate transmembrane transporter activity | 1.32E-02 |
| 28 | GO:0005351: sugar:proton symporter activity | 1.44E-02 |
| 29 | GO:0061630: ubiquitin protein ligase activity | 2.41E-02 |
| 30 | GO:0016887: ATPase activity | 4.19E-02 |