Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
2GO:0032206: positive regulation of telomere maintenance0.00E+00
3GO:0046486: glycerolipid metabolic process0.00E+00
4GO:0006907: pinocytosis0.00E+00
5GO:0043087: regulation of GTPase activity7.23E-05
6GO:0006436: tryptophanyl-tRNA aminoacylation7.23E-05
7GO:0051013: microtubule severing7.23E-05
8GO:0009825: multidimensional cell growth1.64E-04
9GO:0001736: establishment of planar polarity1.74E-04
10GO:0006650: glycerophospholipid metabolic process1.74E-04
11GO:0045910: negative regulation of DNA recombination2.93E-04
12GO:0046168: glycerol-3-phosphate catabolic process2.93E-04
13GO:0042127: regulation of cell proliferation3.31E-04
14GO:0009958: positive gravitropism4.18E-04
15GO:0045017: glycerolipid biosynthetic process4.23E-04
16GO:0051513: regulation of monopolar cell growth4.23E-04
17GO:0034059: response to anoxia4.23E-04
18GO:0007276: gamete generation4.23E-04
19GO:0006072: glycerol-3-phosphate metabolic process4.23E-04
20GO:0009956: radial pattern formation5.65E-04
21GO:0009696: salicylic acid metabolic process7.14E-04
22GO:0009627: systemic acquired resistance8.15E-04
23GO:0060918: auxin transport8.73E-04
24GO:0016554: cytidine to uridine editing8.73E-04
25GO:0009920: cell plate formation involved in plant-type cell wall biogenesis8.73E-04
26GO:0009942: longitudinal axis specification1.04E-03
27GO:0010444: guard mother cell differentiation1.21E-03
28GO:0009610: response to symbiotic fungus1.21E-03
29GO:1900056: negative regulation of leaf senescence1.21E-03
30GO:0000082: G1/S transition of mitotic cell cycle1.21E-03
31GO:0030001: metal ion transport1.34E-03
32GO:0010492: maintenance of shoot apical meristem identity1.40E-03
33GO:0009926: auxin polar transport1.51E-03
34GO:0019430: removal of superoxide radicals1.59E-03
35GO:0046916: cellular transition metal ion homeostasis1.80E-03
36GO:0000723: telomere maintenance2.01E-03
37GO:1900865: chloroplast RNA modification2.01E-03
38GO:0048829: root cap development2.23E-03
39GO:0006298: mismatch repair2.23E-03
40GO:0006782: protoporphyrinogen IX biosynthetic process2.23E-03
41GO:0048765: root hair cell differentiation2.46E-03
42GO:0009887: animal organ morphogenesis3.19E-03
43GO:0010540: basipetal auxin transport3.19E-03
44GO:0009933: meristem structural organization3.19E-03
45GO:0009734: auxin-activated signaling pathway3.46E-03
46GO:0006863: purine nucleobase transport3.71E-03
47GO:0006418: tRNA aminoacylation for protein translation4.26E-03
48GO:0043622: cortical microtubule organization4.26E-03
49GO:0003333: amino acid transmembrane transport4.54E-03
50GO:0016226: iron-sulfur cluster assembly4.83E-03
51GO:0010091: trichome branching5.43E-03
52GO:0000226: microtubule cytoskeleton organization6.05E-03
53GO:0009741: response to brassinosteroid6.38E-03
54GO:0010305: leaf vascular tissue pattern formation6.38E-03
55GO:0008654: phospholipid biosynthetic process7.04E-03
56GO:0009658: chloroplast organization7.59E-03
57GO:0010583: response to cyclopentenone7.72E-03
58GO:0019760: glucosinolate metabolic process8.43E-03
59GO:0000910: cytokinesis9.16E-03
60GO:0016126: sterol biosynthetic process9.54E-03
61GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.74E-03
62GO:0015995: chlorophyll biosynthetic process1.07E-02
63GO:0048481: plant ovule development1.15E-02
64GO:0009817: defense response to fungus, incompatible interaction1.15E-02
65GO:0009832: plant-type cell wall biogenesis1.19E-02
66GO:0010311: lateral root formation1.19E-02
67GO:0006865: amino acid transport1.32E-02
68GO:0006839: mitochondrial transport1.49E-02
69GO:0009744: response to sucrose1.63E-02
70GO:0009965: leaf morphogenesis1.77E-02
71GO:0005975: carbohydrate metabolic process1.93E-02
72GO:0048367: shoot system development2.31E-02
73GO:0048316: seed development2.31E-02
74GO:0009624: response to nematode2.58E-02
75GO:0051726: regulation of cell cycle2.69E-02
76GO:0009793: embryo development ending in seed dormancy3.26E-02
77GO:0040008: regulation of growth3.69E-02
78GO:0045490: pectin catabolic process3.81E-02
79GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.13E-02
80GO:0006470: protein dephosphorylation4.19E-02
81GO:0071555: cell wall organization4.98E-02
RankGO TermAdjusted P value
1GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
2GO:0005096: GTPase activator activity6.44E-05
3GO:0008568: microtubule-severing ATPase activity7.23E-05
4GO:0004830: tryptophan-tRNA ligase activity7.23E-05
5GO:0004047: aminomethyltransferase activity1.74E-04
6GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.74E-04
7GO:0004109: coproporphyrinogen oxidase activity1.74E-04
8GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity2.93E-04
9GO:0043047: single-stranded telomeric DNA binding4.23E-04
10GO:0080031: methyl salicylate esterase activity4.23E-04
11GO:0010011: auxin binding5.65E-04
12GO:0010328: auxin influx transmembrane transporter activity5.65E-04
13GO:0030983: mismatched DNA binding8.73E-04
14GO:0080030: methyl indole-3-acetate esterase activity8.73E-04
15GO:0004784: superoxide dismutase activity8.73E-04
16GO:0042162: telomeric DNA binding1.21E-03
17GO:0046914: transition metal ion binding1.59E-03
18GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.19E-03
19GO:0005345: purine nucleobase transmembrane transporter activity4.26E-03
20GO:0030570: pectate lyase activity5.13E-03
21GO:0004812: aminoacyl-tRNA ligase activity5.74E-03
22GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity6.38E-03
23GO:0003684: damaged DNA binding8.43E-03
24GO:0016791: phosphatase activity8.43E-03
25GO:0004721: phosphoprotein phosphatase activity1.07E-02
26GO:0004722: protein serine/threonine phosphatase activity1.24E-02
27GO:0003697: single-stranded DNA binding1.36E-02
28GO:0004519: endonuclease activity1.52E-02
29GO:0035091: phosphatidylinositol binding1.72E-02
30GO:0015293: symporter activity1.77E-02
31GO:0051287: NAD binding1.86E-02
32GO:0003690: double-stranded DNA binding2.06E-02
33GO:0016298: lipase activity2.06E-02
34GO:0015171: amino acid transmembrane transporter activity2.16E-02
35GO:0004650: polygalacturonase activity2.42E-02
36GO:0003779: actin binding2.53E-02
37GO:0016829: lyase activity3.20E-02
38GO:0008017: microtubule binding3.94E-02
39GO:0005525: GTP binding4.06E-02
40GO:0046872: metal ion binding4.53E-02
RankGO TermAdjusted P value
1GO:0005697: telomerase holoenzyme complex1.74E-04
2GO:0009331: glycerol-3-phosphate dehydrogenase complex4.23E-04
3GO:0042646: plastid nucleoid4.23E-04
4GO:0009986: cell surface1.21E-03
5GO:0000784: nuclear chromosome, telomeric region1.59E-03
6GO:0042644: chloroplast nucleoid1.80E-03
7GO:0009574: preprophase band2.94E-03
8GO:0009295: nucleoid8.79E-03
9GO:0009707: chloroplast outer membrane1.15E-02
10GO:0009941: chloroplast envelope2.49E-02
11GO:0009507: chloroplast3.06E-02
12GO:0046658: anchored component of plasma membrane4.65E-02
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Gene type



Gene DE type