Gene: AT4G02220
     

Gene description


TAIR ID: AT4G02220

Short description: zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein

Pathogen responsiveness: -0.27

General responsiveness: -1.67

GO biological process


unkown


GO cellular component


nucleus, cytoplasm


GO molecular function


unkown


Protein domain


PfamPF01753, MYND finger
PfamPF04194, Programmed cell death protein 2, C-terminal putative domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d1.507.98E-08
GSE17464Penta, controlPenta, PstDC3000 12 h1.788.57E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.954.11E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.847.98E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.532.04E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.061.89E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.543.84E-17
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.711.58E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.083.18E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.282.67E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.551.09E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.533.93E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.652.13E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.191.20E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.151.57E-03






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